This is the main OCTRON repository.

OCTRON is a pipeline built on napari that enables segmentation and tracking of animals in behavioral setups. It helps you to create rich annotation data that can be used to train your own machine learning segmentation models. This enables dense quantification of animal behavior across a wide range of species and video recording conditions.

OCTRON is built on Napari, Segment Anything (SAM2), YOLO, BoxMOT and 💜.

Documentation

All documentation can be found under OCTRON-docs on github pages.

Support

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