Skip to content

v1.0.0

Choose a tag to compare

View all tags
@chenv3 chenv3 released this 24 Oct 16:17
· 158 commits to main since this release
v1.0.0
40035f8
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Verified
Learn about vigilant mode.

What's Changed

  • Establishment of Basic Pipeline by @chenv3 in #1
    • Cell Ranger analysis for different 10x technologies available via different options with version flag
      • GEX
      • VDJ
      • CITE-Seq
      • Multi
      • ATAC
      • Multiome
    • Creates summary excel file and copies of Cell Ranger web report in final report folder
    • Required flags are input, output, version, and genome
      • Genome currently only supports hg38 and mm10
  • Patch to add json module by @skchronicles

Full Changelog: https://github.com/OpenOmics/cell-seek/commits/v1.0.0

Contributors

skchronicles and chenv3
Assets 2
Loading