ActiNet for Willetts labels #32
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aidanacquah
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Oct 22, 2025
src/actinet/hmm.py
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| from actinet.utils.sleep_utils import (add_sleep_sedentary_transitions, | ||
| HMM_SLEEP_CODE, HMM_SEDENTARY_CODE, HMM_LIGHT_CODE, HMM_MVPA_CODE) | ||
| from actinet.utils.sleep_utils import add_sleep_sedentary_transitions | ||
| # HMM_SLEEP_CODE, HMM_SEDENTARY_CODE, HMM_LIGHT_CODE, HMM_MVPA_CODE) |
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Yeah, was previously using these to train hmm transitions from sleep to sedentary.
This only works for the Walmsley labels.
We need to find a more flexible approach in future implementations for Willetts, Doherty and other models.
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This PR implements the flexibility of using ActiNet to produce Walmsley2020 (sleep, sedentary, light, MVPA) or Willetts (sleep, sit-stand, vehicle, mixed, walking, bicycling) labels.
Some restructuring of the repo has been implemented to accomodate this.
Also updates to the documentation