Do not use deprecated Numpy functionality in the protein visualizer #441
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Do not depend on the deprecated functionality of
numpyin the protein visualizer.The visualizer relied on being able to add assign to a scalar with an array containing a single position. The PR unvectorizes the plotting code and extends typing annotations. The plotting code is not at all a performance bottleneck, therefore it is better to improve the readability at the expense of marginal performance losses.