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Merged
elmbeech merged 40 commits into from
Jul 23, 2025
Merged

branch v3 #37

elmbeech merged 40 commits into from
Jul 23, 2025

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@elmbeech
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@elmbeech elmbeech commented Jul 23, 2025

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elmbeech added 30 commits March 13, 2025 06:19
@elmbeech
@ pcdl : towards release v3.3.5.
95c2394
@elmbeech
@ make_cell_vtk : fix first attribute coloring for on the fly visuali…
ecbde94 
…zation.
@elmbeech
@ pcdl : towards release v3.3.5.
dbcc08b
@elmbeech
@ plot_scatter : set marker dot size based on cell volume.
a481477
@elmbeech
@ physicelldataloader : release v3.3.5.
8744c49
@elmbeech
@ physicelldataloader : next release v3.3.6.
9aec3c4
@elmbeech
@ pcdl v3 : in the middle of galaxy wrapper implementation.
9291383
@elmbeech
@ pcdl v3 : in the middle of galaxy wrapper implementation.
456f4d9
@elmbeech
@ pcdl : first version of galaxy wrappers.
d86aac3
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
ac5c647 
…tion.
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
9f086c0 
…tion.
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
af07e02 
…tion.
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
1425f7e 
…tion.
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
230bf71 
…tion.
@elmbeech
@ galaxy dev : possible output folder listings.
63c24f1
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
fe509e4 
…tion ~ fetching the output.
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
e062d02 
…tion ~ fetching the output.
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
b8e426b 
…tion ~ fetching the output.
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
03b7144 
…tion ~ unittest writing.
@elmbeech
@ pcdl : in the middle of first version of galaxy wrappers implementa…
cdcea2b 
…tion ~ unittest writing.
@elmbeech
@ get_anndata : fix scale none bug.
a63648a
@elmbeech
@ pcdl_get_version.xml : planemo linting ok (the missing section stru…
ef5712c 
…cture in the test part was causing the error.)
@elmbeech
@ pcdl_*.xml : planemo linting and testing ok.
e278abd
@elmbeech
@ pcdl : pcdl_plot_timeseries.xml worx ~ inclusive unit test.
9a39f07
@elmbeech
@ pcdl : the force awakens.
be971b6
@elmbeech
@ pcdl : add directory parameter to plot_scatter and plot_contour to …
289ceea 
…make then work on galaxy.
@elmbeech
@ physicelldataloader : next release v3.3.7.
8a109e5
@elmbeech
@ pcdl v3 : update man pages.
2bce2b6
@elmbeech
@ pcdlv3 : galaxy implementation being continued.
d176b49
@elmbeech
@ pcdl : plot_scatter and plot_contour galaxy wrapper work.
cfbb020
@elmbeech elmbeech merged commit b207339 into PhysiCell-Tools:v3 Jul 23, 2025
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