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Fix 2129 - CUDA required dependencies #2131

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Fix 2129 - CUDA required dependencies #2131

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f30d9fc
Add CuPy dependency
bhashemian May 3, 2021
be0d7a5
Remove CUDA-based dependencies (only cupy for now)
bhashemian May 3, 2021
6c1feb4
Exclude CUDA-based dependecies from flake8-py3
bhashemian May 3, 2021
e8dd7e9
Install CuPy binary specific to each CUDA version
bhashemian May 3, 2021
f988530
Make cupy package name lowercase
bhashemian May 3, 2021
f507783
Correct matrix environment substring extraction
bhashemian May 3, 2021
8fb305b
Make sed work on Mac too
bhashemian May 4, 2021
1d81bcb
Exclude windows from cupy logic
bhashemian May 4, 2021
89446c4
Revert to CuPy 8.6.0 due to availability on PyPI
bhashemian May 4, 2021
8c0bc6d
Separate creating CuPy binary dependency from installng dependencies
bhashemian May 4, 2021
f1856f0
Use sed to extract CUDA version
bhashemian May 4, 2021
a8413bf
Fix a typo
bhashemian May 4, 2021
fc3d0c6
Merge branch 'dev' into cuda_required_dep
bhashemian May 4, 2021
a2feac3
Remove cucim mac only workaround
bhashemian May 4, 2021
e389a19
Merge branch 'cuda_required_dep' of https://github.com/behxyz/MONAI i…
bhashemian May 4, 2021
07012b7
Merge branch 'dev' into cuda_required_dep
bhashemian May 4, 2021
c71698d
Install cupy on only one cuda environment
bhashemian Jul 26, 2021
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4 changes: 4 additions & 0 deletions .github/workflows/pythonapp.yml
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Expand Up @@ -271,6 +271,10 @@ jobs:
python get-pip.py && \
rm get-pip.py;
fi
- if: matrix.environment == "PT18+CUDA112"
name: Add CuPy dependency to the latest CUDA environment
run: |
echo "cupy-cuda112" >> requirements-dev.txt
- name: Install dependencies
run: |
which python
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1 change: 1 addition & 0 deletions requirements-dev.txt
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Expand Up @@ -32,3 +32,4 @@ sphinx-autodoc-typehints==1.11.1
sphinx-rtd-theme==0.5.2
cucim~=0.19.0; platform_system == "Linux"
openslide-python==1.1.2
cupy==8.6.0