Skip to content

install from/with conda #3667

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
wyli merged 2 commits into from
Jan 14, 2022
Merged

install from/with conda #3667

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
b5ace8b
install from/with conda
rijobro Jan 14, 2022
297ae1d
Merge branch 'dev' into conda_installation_md
wyli Jan 14, 2022
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
17 changes: 16 additions & 1 deletion docs/source/installation.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,7 @@
1. [From PyPI](#from-pypi)
1. [Milestone release](#milestone-release)
2. [Weekly preview release](#weekly-preview-release)
1. [From conda-forge](#from-conda-forge)
2. [From GitHub](#from-github)
1. [System-wide](#milestone-release)
2. [Editable](#weekly-preview-release)
Expand Down Expand Up @@ -47,6 +48,13 @@ To report any issues on the weekly preview, please include the version and commi
python -c "import monai; print(monai.__version__); print(monai.__commit_id__)"
```

## From conda-forge

To install the [current milestone release](https://pypi.org/project/monai/):
```bash
conda install -c conda-forge monai
```

## From GitHub
(_If you have installed the
PyPI release version using ``pip install monai``, please run ``pip uninstall
Expand Down Expand Up @@ -163,13 +171,20 @@ cd MONAI/
pip install -e '.[all]'
```

To install all optional dependencies for MONAI development:
To install all optional dependencies for MONAI development with `pip`:
```bash
git clone https://github.com/Project-MONAI/MONAI.git
cd MONAI/
pip install -r requirements-dev.txt
```

To install all optional dependencies for MONAI development with `conda`:
```bash
git clone https://github.com/Project-MONAI/MONAI.git
cd MONAI/
conda env update -n <name> -f environment-dev.yml
```

Since MONAI v0.2.0, the extras syntax such as `pip install 'monai[nibabel]'` is available via PyPI.

- The options are
Expand Down