5308 Add runtime cache support to `CacheDataset`#5365

Merged

wyli merged 102 commits intoProject-MONAI:devfrom

Nic-Ma:5308-shared-cache

Nov 9, 2022

Commits on Feb 1, 2021

Merge pull request #19 from Project-MONAI/master
Nic-Ma
authored

Commits on Feb 24, 2021

Merge pull request #32 from Project-MONAI/master
Nic-Ma
authored

Commits on Jul 22, 2021

Merge pull request #180 from Project-MONAI/dev
Nic-Ma
authored

Commits on Sep 8, 2021

Merge pull request #214 from Project-MONAI/dev
Nic-Ma
authored

Commits on Apr 4, 2022

Merge pull request #397 from Project-MONAI/dev
Nic-Ma
authored

Commits on Jul 8, 2022

Merge pull request #429 from Project-MONAI/dev
Nic-Ma
authored

Commits on Oct 10, 2022

5090 releasing 1.0.0 (#5170)
wyli
committed
Remove batch dim in `SobelGradients` and `SobelGradientsd` (#5182)

KumoLiu
authored and
wyli
committed
Add channel dim in `ComputeHoVerMaps` and `ComputeHoVerMapsd` (#5183)

authored and
wyli
committed
update federated learning figure (#5194)

holgerroth
authored and
wyli
committed
Fix typo in `RandScaleIntensityd` (#5210)

KumoLiu
authored and
wyli
committed
5193 5204 import error msg/warnings (#5205)
wyli
committed
5211 5214 infer device from first item RandElastic, simplify `first_key()` default (#5213)
wyli
committed
3844 flexible min/max_pixdim options for Spacing (#5212)
wyli
committed
4264 Add antialiasing option for `Resized` (#5223)

yiheng-wang-nv
authored and
wyli
committed
Visualisation classes to allow kwargs. combine GradCAM and ++ test files (#5224)

rijobro
authored and
wyli
committed
protobuf should use PYEXE not pip (#5231)

rijobro
authored and
wyli
committed
5232 Enhance bundle page with more information (#5234)

Nic-Ma
authored and
wyli
committed
5163 metatensor support for `OneOf` (#5217)
wyli
committed
5233 Add file check for the logging config (#5235)

Nic-Ma
and
wyli
committed
Fix 1D data error in `VarAutoEncoder` (#5236)

KumoLiu
and
wyli
committed
Solve LoadImage issue when track_meta is False (#5239)

macdavid
authored and
wyli
committed
Add multi-gpu support to MonaiAlgo (#5228)

holgerroth
authored and
wyli
committed
HoVerNet Mode and Branch to independent StrEnum (#5219)

authored and
wyli
committed
Occlusion sensitivity to use slidiing_window_inference (#5230)

rijobro
authored and
wyli
committed
UpSample optional kernel_size for deconv mode (#5221)

myron
authored and
wyli
committed
5251 replace None type metadict content with 'none' (#5252)
wyli
committed
fix bug in retina detector (#5255)

authored and
wyli
committed
[pre-commit.ci] pre-commit suggestions/consolidate autofixes (#5256)

committed
5253 fixes output offset - spacing (#5254)
wyli
committed
4320 update docstrings for gradient based saliency (#5268)
wyli
committed
CVE-2007-4559 Patch (#5274)

authored and
wyli
committed
Upsample mode deconvgroup (#5282)

myron
authored and
wyli
committed
5187 update the docstring of the is_pad parameter (#5296)

binliunls
authored and
wyli
committed
4206 adds ext tests and deps (#4207)
wyli
committed
fixes cherrypicking issues of spacing
wyli
committed

Commits on Oct 11, 2022

5304 Add authenticated option for bundle api (#5306)

yiheng-wang-nv
authored and
wyli
committed
5269 5291 Update PyTorch base docker to 22.09 (#5293)

committed
[ReadyForReview] Auto3DSeg DataAnalyzer OOM and other minor issue (#5278)

mingxin-zheng
authored and
wyli
committed

Commits on Oct 12, 2022

updates to Gaussian map for sliding window inference (#5302)

myron
authored and
wyli
committed
fixes DiceCELoss for multichannel targets (#5292)

authored and
wyli
committed

Commits on Oct 13, 2022

auto updates (#5321)

monai-bot
authored and
wyli
committed
auto updates (#5322)

monai-bot
authored and
wyli
committed
tutorial 982 984 fixes occ sens, 987 ce loss (#5323)
wyli
committed

Commits on Oct 15, 2022

Fix installation verification command (#5328)

dzenanz
authored and
wyli
committed
Segresnet improvements (#5281)

authored and
wyli
committed
SlidingWindowInferer: option to adaptively stitch in cpu memory for large images (#5297)

myron
and
wyli
committed
Command format fix with backslashes on Windows System (#5280)

authored and
wyli
committed
adding a multigpu test of TestFLMonaiAlgo (#5327)

wyli
and
monai-bot
committed
Dicece check for float target (#5326)

myron
authored and
wyli
committed
MonaiAlgo FedStats (#5240)

holgerroth
authored and
wyli
committed

Commits on Oct 17, 2022

Commits on Oct 18, 2022

Commits on Oct 19, 2022

MonaiAlgo: fix logging in multi-gpu training (#5355)

holgerroth
authored and
wyli
committed
str2list utility for commandline parsing of comma separated lists (#5358)

myron
authored and
wyli
committed

Commits on Oct 20, 2022

Commits on Oct 21, 2022

Commits on Oct 22, 2022

Commits on Oct 23, 2022

[DLMED] update according to comments
Nic-Ma
committed

Commits on Oct 24, 2022

Commits on Oct 25, 2022

Merge branch 'dev' into 5308-shared-cache
wyli
authored

Commits on Nov 3, 2022

Commits on Nov 9, 2022