-
Notifications
You must be signed in to change notification settings - Fork 88
Add more unit tests #483
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Add more unit tests #483
Conversation
`pathology_nuclei_segmentation_classification` Signed-off-by: KumoLiu <yunl@nvidia.com>
Signed-off-by: KumoLiu <yunl@nvidia.com>
`endoscopic_tool_segmentation_dist` Signed-off-by: KumoLiu <yunl@nvidia.com>
`endoscopic_tool_segmentation` Signed-off-by: KumoLiu <yunl@nvidia.com>
Signed-off-by: KumoLiu <yunl@nvidia.com>
`wholeBody_ct_segmentation` Signed-off-by: KumoLiu <yunl@nvidia.com>
… add-unittests
pathology_nuclei_classification Signed-off-by: KumoLiu <yunl@nvidia.com>
… add-unittests
pathology_nuclick_annotation Signed-off-by: KumoLiu <yunl@nvidia.com>
lung_nodule_ct_detection Signed-off-by: KumoLiu <yunl@nvidia.com>
Signed-off-by: KumoLiu <yunl@nvidia.com>
|
/build |
wyli
left a comment
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Thanks, it looks good to me. cc @yiheng-wang-nv please help confirm..
|
Thanks @KumoLiu , could you also temporarily modify bundles that added unit tests in order to trigger the tests? |
Signed-off-by: KumoLiu <yunl@nvidia.com>
|
can refer to: |
Signed-off-by: KumoLiu <yunl@nvidia.com>
Signed-off-by: Yiheng Wang <vennw@nvidia.com>
|
need sometime to figure how to solve the resource issue of github action. |
I will help take a look at this one. |
This reverts commit 9b4b43d.
|
/build |
pathology_nuclei_segmentation_classification Signed-off-by: KumoLiu <yunl@nvidia.com>
|
/build |
Signed-off-by: KumoLiu <yunl@nvidia.com>
…into add-unittests
|
/build |
Signed-off-by: KumoLiu <yunl@nvidia.com>
for more information, see https://pre-commit.ci
This reverts commit 3ee1b48.
Signed-off-by: Yiheng Wang <vennw@nvidia.com>
Signed-off-by: Yiheng Wang <vennw@nvidia.com>
for more information, see https://pre-commit.ci
Signed-off-by: Yiheng Wang <vennw@nvidia.com>
|
/build |
Signed-off-by: KumoLiu <yunl@nvidia.com>
Signed-off-by: KumoLiu <yunl@nvidia.com>
Signed-off-by: KumoLiu <yunl@nvidia.com>
|
/build |
Fixes # . ### Description This PR is used to add unit tests on the following bundles: - [x] endoscopic_tool_segmentation - [x] pathology_nuclei_segmentation_classification - [x] wholeBody_ct_segmentation - [x] pathology_nuclei_classification - [x] pathology_nuclick_annotation - [x] lung_nodule_ct_detection ### Status **Ready/Work in progress/Hold** ### Please ensure all the checkboxes: <!--- Put an `x` in all the boxes that apply, and remove the not applicable items --> - [x] Codeformat tests passed locally by running `./runtests.sh --codeformat`. - [ ] In-line docstrings updated. - [ ] Update `version` and `changelog` in `metadata.json` if changing an existing bundle. - [ ] Please ensure the naming rules in config files meet our requirements (please refer to: `CONTRIBUTING.md`). - [ ] Ensure versions of packages such as `monai`, `pytorch` and `numpy` are correct in `metadata.json`. - [ ] Descriptions should be consistent with the content, such as `eval_metrics` of the provided weights and TorchScript modules. - [ ] Files larger than 25MB are excluded and replaced by providing download links in `large_file.yml`. - [ ] Avoid using path that contains personal information within config files (such as use `/home/your_name/` for `"bundle_root"`). --------- Signed-off-by: KumoLiu <yunl@nvidia.com> Signed-off-by: Yiheng Wang <vennw@nvidia.com> Co-authored-by: Yiheng Wang <vennw@nvidia.com> Co-authored-by: Yiheng Wang <68361391+yiheng-wang-nv@users.noreply.github.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Fixes # .
Description
This PR is used to add unit tests on the following bundles:
Status
Ready/Work in progress/Hold
Please ensure all the checkboxes:
./runtests.sh --codeformat.versionandchangeloginmetadata.jsonif changing an existing bundle.CONTRIBUTING.md).monai,pytorchandnumpyare correct inmetadata.json.eval_metricsof the provided weights and TorchScript modules.large_file.yml./home/your_name/for"bundle_root").