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small fix to make sure setpoint arrays the the proper type #545
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peendebak
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Apr 12, 2019
* allow recent versions of numpy * Fix 1D fast scan. (#471) * adding the functions _cost_gaussian and fit_gaussian to algorithms/functions * adjusted following Pieter's suggestions, plus improving initial guess for the maen * fix for simulation instrument * code cleanup * refactor code; update requirements.txt * fix unit test * refactor dotsystem * A static methods does have not a self. * refactor dotsystem * refactor code * add units for 1D scans * refactor code; fix redundant inter-site variables * add tests * fix typo * add interface functions * fix bug in code; disable multiprocessing by default * add 2x2 example to unfinished * Fixing the virtual AWG (#474) * Fixed marker. * Fixed pulse gates. * Try fixing awg_to_plunger. * Other found fixes. * Added documentation. Removed unneeded simulated AWG. (#476) * [DEM-524] Improve HDAWG8 virtual awg backend (#475) * [DEM-524] Improve HDAWG8 virtual awg backend * Update generate_csv_sequence_program for ZI HDAWG8 (#482) * [DEM-607] Updated HDAWQG8's upload_waveform method * Removed initial_value from sampling_rate in ZurichInstrumentsHDAWG8 * [DEM-599] Tektronix for Characterization (#478) * Added virtual AWG ipython notebook example. * Updated example. Removed redundant prints. Added width dict items to pulse commands. * Tested example on XLD. * change arb. to a.u.; fix double sentence * Fix digitizer handling (#477) * [DEM-622] Example for using ZI HDAWG8 and UHFLI in videomode (#483) * Added the videomode example. * Fixed measure segment for UHFLI. * Disable output channel at the end of the example * Improve VirtualDAC functionality (#481) * Allow virtualdac to work with instrument names instead of indices. * Remove test*py from .gitignore. * Add tests; refactor virtual instruments. * Remove deprecated instrument. * Remove legacy check on boundary. * Menu and filter (#479) Added menu to clean up GUI, added filename filter * Use pep8 naming style. (#484) * Improve functionality of dataset_labels (#485) * Example nbs cjvd (#487) * Add adjustments to documentation of sensing dot tuning. * Fix that pandoc will be installed with conda to build documentation with sphinx. * Add docs/modules.rst to gitignore. * Add to documentation that sensing dot data is simulated and inter-dot transition data comes from an experiment. * Add ylabel to the simulated charge sensor figure. * Add re-formulations of documentation in jupyter notebook of the classical dot simulation. * Add adjustments to simulation example notebook. * Fix virtual AWG startzero setting (#491) * Small updates to virtual AWG. * Fix bug in range conversion of video mode. * Improve docs; add debugging output. * Setting addition and changes in exceptions. * Add detectCoulombPeaks which directly works an arrays of data. (#488) * Add detectCoulombPeaks which directly works an arrays of data. * Fix minor issues in code for coulomb peak detection. * Rename detectCoulombPeaks to analyseCoulombPeaksArray. * Changed istep argument to sampling_rate. * fix rtd build with qupulse (#493) * make code compatible with opencv4 (#495) * 2x2 tuning example (#452) * Adjust awg to plunger code (#461) * data for awg_to_plunger analysis example * adjusting the awg_to_plunger code and the example * fix comma in import * adjustments following Pieter's suggestions * address PR comments * Upstream qcodes does not allow special characters any more (#492) * Addition line fitting (#489) * Add fit_add_line_arr to fit an addition line on data in the form of arrays and adjust the initial guess for the center and the slope in initFermiLinear * Add adjustments to addition line fitting code based on pr comments. * Rename fit_add_line_array and update tests * Added verbose. Write out argument names. * Feat/markov chains (#486) * add continuous-time Markov model * replace generation of RTS signal with markov chain (fixes initialiation); fix plot label * add mean segment length example to elzerman notebook * solve problem with legacy interface of lstsq * updates to RTS code * fix issue with empty bins * fix bug in new histogram calculation * update notebook * implemented the discussed improvements to the RTS code and the Elzerman readout notebook * small fixes to rts code * add continuous-time Markov model * replace generation of RTS signal with markov chain (fixes initialiation); fix plot label * add mean segment length example to elzerman notebook * solve problem with legacy interface of lstsq * update example notebook * updates to RTS code * fix issue with empty bins * fix bug in new histogram calculation * update notebook * implemented the discussed improvements to the RTS code and the Elzerman readout notebook * improve initial guess of double gaussian * Implemented better version of pulse gates. (#494) * Implemented better version of pulse_gates. * Fix comments. * Removed unneeded function. * Fix/ezlerman notebook (#496) * Fix docstring. * Update notebook; add notebook to travis. * Fix path separators in travis files. * Fix notebook list for travis. * Fix AWG to plunger (#502) * Change the AWG to plunger to the old convention. * Fixed scaling ratio by checking at V2. * Renamed AWG to plunger into AWG to gate. * Improve speed of markov chain generation (#500) * improve speed of markov chain generation * fix tests * Rename the default measure_names in scan2Dfast (#503) * Rename the default measure_names in scan2Dfast from FPGA_ch to READOUT_ch. * Remove plotparam from scan2dturbo. * Disabled not working unittest. (#506) * Add support to synchronize a DataSet to JSON format (#505) * Add json tools. * Update docstrings; rename encoder/decoder. * Remove json module. * Cosmetic changes in data and json serializer. * Improve coulomb peak fitting (#501) * refactor coulomb peak fitting code. * refactor arguments of coulomb peak fitting code. * Allow for stepvalues usage for MultiParameter handling in scan2Dfast (#498) * Add usage of stepvalues for operation of MultiParameter. * Reduce indentation. * Do not use deprecated numpy.matrix (#507) * Do not use deprecated numpy matrix. * Fix warnings in tests; update docstrings. * [DEM-793] Allow negative trigger delays (#509) * [DEM-793] Allow negative trigger delays * travis debug * update requirements * reverting travis debug line * Addressing comments from code review * Update qtt/instrument_drivers/virtualAwg/templates.py Co-Authored-By: qSaevar <39056113+qSaevar@users.noreply.github.com> * Misc updates from qi fridge (#504) * enable multi channel plotting * allow more flexible plotting * add mean segment tunnelrates to output * improve notes for ppt; add debugging output * fix for double scan range in virtual awg * refactor live plotting initialization into method * fix refactor of live plotting * no gui test on travis * create explicit variable for debugging information * fix typo in sampling rate mapping * allow to disable live plotting * Updated sample_rate values. * Updated unittest of ZI hdawg8. * [DEM-812] Create pulse template for signal delay calibration (#510) * [DEM-812] Create pulse template for signal delay calibration. * T->period, A->amplitude. * Merge keysight updates into dev (#512) * Version with HVI. Marker delay not calibrated. * Updated hvi example of vitual AWG. * Added fix pulse gates. * Fixed M3601A imports. * Updated HVI example. * [DEM-664] measure_segment on uhfli returns variable amount of data (#513) * [DEM-665] Ripple in sawtooth in videomode with HDAWG/UHFLI (#515) * fix bug in initial estimate of fermi fitting (#499) * refactor code; fix bug in initial estimate * add test for exponential fitting; add option to fix offset in exponential fitting * make figures in notebook larger * cleanup code * create separate plot function; add test * simplify interface to cost_exp_function * fix test * Improve VirtualAwg interface (#511) * Rename pulse parameters. * Add method to create virtualawg wave from qupulse template. * Make make_markers public. * Refactor measuresegment for m4i; remove legacy fpga code. * Fix bugs in new m4i readout method. * Fix 2d scan interface in virtual awg. * Add 2d sawtooth processing. * Rename process_digitizer_trace. * Fix bug in argument passing. * Fixed measure segment without processing. * Update plotting in measuresegment. * Fixed sampling rate with prescaling of Keysight AWG's. * Added Tektronix example. * refactor fitting of polarization line (#514) * refactor fitting of polarization line * cleanup gatesweep module; add plot method for polarization line * cleanup plotting of coulomb peaks * refactor plot function in RTS * autopep all python files (#516) * Added code coverage (#518) * Add coverage to travis. * Updated requirements to resolve numpy problems. * Add pgeometry tests. * Fix codacy warnings (#519) * Fix codacy errors. * Drop support for python2. * Remove codacy warnings. * Autopep with whitespace; fix warnigns. * fix bug introduced in videomode (#517) * Fix bug introduced in videomode. * Add check on number of slides. * Create QApplication instance. * Updates from XLD fridge (#521) * Various fixes. * Update travis file with code from scipy. * Fix issue with get_dataset. * autopep -a * Try older dist in travis. * Temove legacy method. * Fix to make output a float. * Make exception catch more specific. * Add option to set slide background color (#522) * Add option to set background color for PPT slides. * increase version tag; enable mypy (#523) * Increase version tag. * Fix mypy errors. * Add mypy to travis. * Improve test and fix bug introduced in #507. * Fix conditional function addPPTslide. * Added .mypy_cache to gitignore. * Fix tests (upstream change); fix warnings (#524) * Cleanup code for virtual dot array (#528) Cleanup code for virtual dot array; fix example notebooks * add method to create powerpoint callback button (#525) * Add method to create powerpoint callback button. * Update tools.py * Added docstring example. * Update fastScan for new virtual awg (#526) * add serialization of qcodes instrument (#527) * Move UnitTests (#520) * Moved unittests and source code. * Updated pytest configuration. * Removed unneeded Dockerfile. * Move to pip installation. * Moved tests. * Reverted removed files. * Fix Travis file. * make sure the original axes is restored (#530) * Cleanup test structure (#529) * remove commented code * remove unneccessary ignore * remove old files; update pytest.ini * add tests pg_scaling; fix pg_scaling * fix warnings * fix qtt_example; add tests (#532) * fix qtt_example; add tests * max max slides count a bit more relaxed * autopep * Fix codecy (#533) * Fix codacy errors. (#534) * add settings of videomode to notes (#536) * add settings of videomode to notes * cleanup code * autopep * Fix rts fitting (#535) * fix label of rts notebook * use figure numbers for plot windows * use figure numbers for plot windows * reduce verbosity * fix add_ppt figure argument * add exception for incorrect resolution (#537) * Improve unit testing (#538) * add test for videomode get_dataset * fix tests * fix travis * add xvfb service * add xvfb debugging output * add xvfb flag * update notebook execution * add to videomode test * enable test of parameterviewer * move notebook to measurement subdir * remove dependency on pre-installed qcodes; fix license reference (#539) * cleanup bias triangle fitting code (#541) * cleanup bias triangle fitting code * autopep * Fix acquire segments pretrigger (#540) * fix acquire_segments delay; small fixes * remove commented code * autopep * fix converting dict to DataSet * fix for getting dataset in vector scan * fix issue with get_dataset; add test * Cleanup installation (#542) * remove legacy method for jupyter kernel * remove colorama from qtt * remove notes specific for spin-qubits * remove slacker from qtt requirements * add qupulse to setup.py * add tests for timestamp instrument; add offset parameter (#544) * add test for timestamp instrument * update tests * fix codacy warnings * Cleanup of anticrossing fitting code (#543) * cleanup anticrossing code * pass linewidth * autopep * update notebook * small fix (#545)
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