chore: scrub private/personal references from the public repo

[yilu331]

What

This is the public/open-source repo, so it must not point readers at content only visible in the private reflexio-enterprise repo, nor leak personal/local paths. All changes are comment/docstring/doc-only — no behavior change.

Private reflexio-enterprise references

• 7× reflexio-enterprise#59 private-issue citations dropped across the pending-request-queue ("R2") code + tests (kept the R2 label).
• bootstrap_config.py — removed the dead See docs_for_coding_agent/… pointer (private-only doc).
• setup_cmd.py (openai-codex --help) — stopped pointing at the private reflexio_ext/scripts/start_with_codex_proxy.sh.
• .claude/rules/pythonic-code.md — genericized a reflexio_ext/scripts/ path example.

Open-core extension-seam mentions (genericized)

• env_loader.py, lib/_storage_labels.py, server/README.md — reworded reflexio_ext mentions to describe the extension contract without naming the private package/file path.

gdpval benchmark — scrubbed in place (kept public)

benchmark/gdpval/ stays public (needed for marketing data/claims). Made it public-appropriate: replaced personal /Users/<user>/… paths with generic/$ENV paths, dropped the private reflexio-gdpval-bench repo name, used public reflexio.cli instead of reflexio_ext.cli, removed a personal ~/.claude/plans/ reference. Framework names (OpenSpace/Hermes) kept — part of the published RESULTS.md narrative; code resolves their paths via env vars.

Verification

• import reflexio OK; ruff clean; py_compile OK on changed gdpval modules.
• git grep for reflexio-enterprise#59, /Users/, reflexio-gdpval-bench, gdpval reflexio_ext → clean.

[coderabbitai]

📝 Walkthrough

Walkthrough

This PR removes stale references to enterprise extension identifiers and outdated documentation throughout the codebase. Changes include correcting path comments, updating environment configuration descriptions, simplifying R2-related issue references, and generalizing authentication and storage documentation to avoid explicit enterprise extension mentions.

Changes

Documentation and reference cleanup

Layer / File(s)	Summary
CLI and environment configuration documentation .claude/rules/pythonic-code.md, reflexio/cli/bootstrap_config.py, reflexio/cli/commands/setup_cmd.py, reflexio/cli/env_loader.py	Path comment updated to reflect correct directory mapping, external documentation pointer removed from bootstrap config, setup command instructions rewritten to describe automatic token pickup instead of legacy script invocation, and environment module selection generalized to describe both OS package and downstream build scenarios.
Core library and server documentation reflexio/lib/_storage_labels.py, reflexio/server/README.md	Storage type matching docstring clarified regarding enterprise extension dependency, and authentication pattern description generalized to remove explicit reference to enterprise extension module path.
Implementation comments in generation and operation services reflexio/server/services/base_generation_service.py, reflexio/server/services/operation_state_utils.py, reflexio/server/services/storage/storage_base/_operations.py	Inline comments and docstrings simplified by removing enterprise issue reference suffix from R2 behavior descriptions in serialization, lock management, and bookmark semantics across three service files.
Test documentation cleanup tests/e2e_tests/test_concurrent_playbook_extraction.py, tests/server/services/storage/test_storage_contract_operations.py, tests/server/services/test_base_generation_service.py, tests/server/services/test_operation_state_utils.py	Test module and section headers simplified by removing enterprise issue reference from R2-related scenario labels and pending request queue descriptions.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

• ReflexioAI/reflexio#113: Both PRs modify reflexio/server/README.md authentication pattern section to generalize descriptions and reduce stale enterprise-specific references.
• ReflexioAI/reflexio#57: This PR further refines test documentation in test_concurrent_playbook_extraction.py by removing the enterprise issue reference while maintaining the R2 scenario label introduced by the earlier PR.

Poem

🐰 References hop away to greener docs so clear,
Enterprise ghosts fade as generic prose draws near,
R2's story stays, but the issue tag takes flight,
Cleaner comments bloom—reflexio shines bright!
✨

🚥 Pre-merge checks | ✅ 5

✅ Passed checks (5 passed)

Check name	Status	Explanation
Docstring Coverage	✅ Passed	Docstring coverage is 100.00% which is sufficient. The required threshold is 80.00%.
Linked Issues check	✅ Passed	Check skipped because no linked issues were found for this pull request.
Out of Scope Changes check	✅ Passed	Check skipped because no linked issues were found for this pull request.
Description Check	✅ Passed	Check skipped - CodeRabbit’s high-level summary is enabled.
Title check	✅ Passed	The title 'chore: scrub private/personal references from the public repo' clearly and accurately summarizes the main change: removing references to private repositories and resources from the public codebase.

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✨ Finishing Touches

📝 Generate docstrings

• Create stacked PR
• Commit on current branch

🧪 Generate unit tests (beta)

• Create PR with unit tests
• Commit unit tests in branch chore/scrub-private-repo-refs

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