Add AI research MVP tools

[kkudumu]

@algora-pbc /claim #13

Summary

• adds a self-contained ai-research-mvp-tools module for paper summaries, pre-review diagnostics, and citation assistance
• supports abstract/executive/layperson summaries, key findings, implications, next steps, domain-specific review checks, similarity evidence, statistical/compliance diagnostics, citation ranking, APA/MLA/Nature formatting, and citation insert actions
• includes sample manuscript/corpus data, dependency-free tests, requirement mapping, CLI demo, SVG source, and demo GIF

Demo

• Demo video: https://raw.githubusercontent.com/kkudumu/SCIBASE.AI/kkudumu/ai-research-mvp-tools-13/ai-research-mvp-tools/docs/demo.mp4
• ai-research-mvp-tools/docs/demo.gif

Verification

cd ai-research-mvp-tools
npm run check
npm test
npm run demo

Review Note

Before submission I ran a local code-review pass and fixed layperson summary grammar plus statistical false positives for p-values and sample-size detection. The regressions are covered in test/ai-research-mvp-tools.test.js.

AI-Assisted Disclosure

This contribution was produced with AI assistance and manually reviewed/verified before submission.

Closes #13

[kkudumu]

/claim #13

[kkudumu]

Follow-up pushed to strengthen the similar-papers widget part of issue #13:

• added an explicit similar-papers widget combining open-access similarity evidence and citation-corpus matches
• each ranked suggestion includes source, score, reasons, and an action for opening a paper or inserting/opening a citation
• surfaced the widget in packet output, demo output, tests, README, and requirement map

Verification after the update:

• cd ai-research-mvp-tools && npm run check
• cd ai-research-mvp-tools && npm test
• cd ai-research-mvp-tools && npm run demo
• git diff --check

[kkudumu]

Follow-up pushed in 87e8b9e to strengthen the context-aware citation support path.

What changed:

• Added extractClaimSentences() and buildClaimSupportReport() for citation-backed claim review.
• Each claim now has an evidenceSpanHash, support status, best citation candidate, candidate count, and insert-or-revise action.
• Research tool packets now include claimSupportReport and include it in packetHash.
• Updated tests, CLI demo, README, and the issue AI-Assisted Research Tools (MVP Level) #13 requirement map.

Verification rerun:

• npm run check
• npm test
• npm run demo
• git diff --check

[kkudumu]

Added a short demo video artifact for Algora/reviewer convenience:

• Demo video: https://raw.githubusercontent.com/kkudumu/SCIBASE.AI/kkudumu/ai-research-mvp-tools-13/ai-research-mvp-tools/docs/demo.mp4
• Existing GIF remains at ai-research-mvp-tools/docs/demo.gif
• CLI demo remains npm run demo

This is the same deterministic demo flow already covered by the local tests and README, now available as an MP4 video artifact.

[kkudumu]

Follow-up for the issue #13 highlighted-text citation and insertion scope.

Added commit 2b7c6bc to cover citation-tool behavior that was previously lighter:

• highlighted-text citation recommendations with matched terms and highlighted-span evidence hashes
• citation insertion plans with manuscript target anchors
• one-click insertion records plus drag payload metadata (application/x-scibase-citation)
• packet/demo output for highlightedCitation and citationInsertionPlan
• tests, README, sample fixture, and requirement-map updates

Verified locally:

• npm run check -> passed
• npm test -> passed
• npm run demo -> passed and now prints highlighted citation plus insertion-plan output
• git diff --check -> passed

This keeps the MVP deterministic while mapping more directly to the issue requirements for citations based on highlighted text and drag-and-drop/one-click manuscript insertion.

[kkudumu]

Updated the existing demo video with narrated voiceover explaining every major change in this PR: summaries, peer-review diagnostics, similar-paper recommendations, citation-backed claim support, highlighted-text citation recommendations, insertion plans, one-click records, and drag payloads. The PR's existing demo-video link now points to the narrated MP4.