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Heewon Seo edited this page Dec 12, 2025 · 10 revisions

Welcome to the Griffin-Pipeline Wiki!

Nanopore sequencing preprocessing tutorial

This Wiki is intended to support users at UCalgary who need to (re)process Nanopore data and optimize the workflow under limited GPU availability on the HPC cluster. We document each step and provide the scripts used to process all data, supporting methodological transparency and research reproducibility.
The main README file provides a general overview of our workflow for processing Oxford Nanopore sequencing data.