`tridesclous` spike sorter not showing as installed

[marcoistasy]

Hello,

I have installed tridesclous as per the instructions here.

However, when running ss.installed_sorters(), I do notsee tridesclous as installed. An image of my environment as well as the problem is attached below.

[samuelgarcia]

I guess import tridesclous is working no ?

[alejoe91]

@marcoistasy waveclus seems to appear in the installed sorters (the last one).

[marcoistasy]

sorry! i meant tridesclous and i've updated the issue accordingly.

[samuelgarcia]

What happen in ipython when you do import tridesclous as tdc
Do you have hdbscan ?

[marcoistasy]

this is the error i get when running import tridesclous as tdc

ModuleNotFoundError                       Traceback (most recent call last)
~/d/n2b/n2b-visification/scripts/io.py in <module>
----> 23 import tridesclous as tdc

~/anaconda/envs/visification/lib/python3.7/site-packages/tridesclous/__init__.py in <module>
     25 from .dataio import DataIO
     26 from .signalpreprocessor import offline_signal_preprocessor, estimate_medians_mads_after_preprocesing
---> 27 from .catalogueconstructor import CatalogueConstructor
     28 from .cataloguetools import apply_all_catalogue_steps
     29 from .peeler import Peeler

~/anaconda/envs/visification/lib/python3.7/site-packages/tridesclous/catalogueconstructor.py in <module>
     47 from .waveformtools import  compute_sparse_mask, compute_shared_channel_mask, compute_projection, compute_boundaries
     48 
---> 49 from .jobtools import run_parallel_read_process_write
     50 
     51 

~/anaconda/envs/visification/lib/python3.7/site-packages/tridesclous/jobtools.py in <module>
     11 import time
     12 import os
---> 13 import loky
     14 
     15 #~ import concurrent.futures.ThreadPoolExecutor

ModuleNotFoundError: No module named 'loky'

hdbscan is installed.

[marcoistasy]

I also opened Issue 176 with tridesclous

[alejoe91]

@marcoistasy I think that pip install loky should fix it!

[marcoistasy]

that fixed it!