Skip to content
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 2 additions & 0 deletions .github/recipe/recipe.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -69,6 +69,7 @@ requirements:
- r-stringr
- r-susier
- r-tibble
- r-tictoc
- r-tidyr
- r-vctrs
- r-vroom
Expand Down Expand Up @@ -115,6 +116,7 @@ requirements:
- r-stringr
- r-susier
- r-tibble
- r-tictoc
- r-tidyr
- r-vctrs
- r-vroom
Expand Down
1 change: 1 addition & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -11,3 +11,4 @@ pecotmr.Rproj
/.pixi
docs
.claude
dev
1 change: 1 addition & 0 deletions DESCRIPTION
Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,7 @@ Imports:
stringr,
susieR,
tibble,
tictoc,
tidyr,
vctrs,
vroom
Expand Down
2 changes: 2 additions & 0 deletions NAMESPACE
Original file line number Diff line number Diff line change
Expand Up @@ -229,6 +229,8 @@ importFrom(susieR,susie_rss)
importFrom(susieR,univariate_regression)
importFrom(tibble,as_tibble)
importFrom(tibble,tibble)
importFrom(tictoc,tic)
importFrom(tictoc,toc)
importFrom(tidyr,replace_na)
importFrom(tidyr,separate)
importFrom(tools,file_path_sans_ext)
Expand Down
169 changes: 135 additions & 34 deletions R/twas_weights.R

Large diffs are not rendered by default.

6 changes: 4 additions & 2 deletions man/twas_multivariate_weights_pipeline.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

7 changes: 6 additions & 1 deletion man/twas_weights.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

5 changes: 5 additions & 0 deletions man/twas_weights_cv.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

7 changes: 6 additions & 1 deletion man/twas_weights_pipeline.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

1 change: 1 addition & 0 deletions pixi.toml
Original file line number Diff line number Diff line change
Expand Up @@ -88,6 +88,7 @@ r45 = {features = ["r45"]}
"r-stringr" = "*"
"r-susier" = "*"
"r-tibble" = "*"
"r-tictoc" = "*"
"r-tidyr" = "*"
"r-vctrs" = "*"
"r-vroom" = "*"