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[Merged by Bors] - Fixed a typo in tutorial #451

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@yebai yebai commented Jan 21, 2023

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yebai commented Jan 21, 2023

bors r+

bors bot pushed a commit that referenced this pull request Jan 21, 2023
@bors bors bot changed the title Fixed a typo in tutorial [Merged by Bors] - Fixed a typo in tutorial Jan 22, 2023
@bors bors bot closed this Jan 22, 2023
@bors bors bot deleted the hg/docfix branch January 22, 2023 00:50
yebai added a commit that referenced this pull request Mar 2, 2023
…eep existing compat) (#469)

* Fixed a typo in tutorial (#451)

* CompatHelper: bump compat for Turing to 0.24 for package turing, (keep existing compat) (#450)

This pull request changes the compat entry for the `Turing` package from `0.21` to `0.21, 0.24` for package turing.
This keeps the compat entries for earlier versions.



Note: I have not tested your package with this new compat entry.
It is your responsibility to make sure that your package tests pass before you merge this pull request.

Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>

* Some minor utility improvements (#452)

This PR does the following:
- Moves the `varname_leaves` from `TestUtils` to main module.
  - It can be very useful in Turing.jl for constructing `Chains` and the like, so I think it's a good idea to make it part of the main module rather than keeping it "hidden" there.
- Makes the default `varinfo` in the constructor of `LogDensityFunction` be `model.context` rather than a new `DynamicPPL.DefaultContext`.
  - The `context` pass to `evaluate!!` will override the leaf-context in `model.context`, and so the current default constructor always uses `DefaultContext` as the leaf-context, even if the `Model` has been `contextualize`d with some other leaf-context, e.g. `PriorContext`. This PR fixes this issue.

* Always run CI  (#453)

I find the current `bors` workflow a bit tedious. Most of the time, I summon `bors` to see the CI results (see e.g. #438). Given that most `CI` tests are quick (< 10mins), we can always run them by default. 

The most time-consuming `IntegrationTests` is still run by `bors` to avoid excessive CI runs.

* Compat with new Bijectors.jl (#454)

This PR makes DPPL compatible with the changes to come in TuringLang/Bijectors.jl#214.

Tests are passing locally.

Closes #455 Closes #456

* Another Bijectors.jl compat bound bump (#457)

* CompatHelper: bump compat for MCMCChains to 6 for package test, (keep existing compat) (#467)

This pull request changes the compat entry for the `MCMCChains` package from `4.0.4, 5` to `4.0.4, 5, 6` for package test.
This keeps the compat entries for earlier versions.



Note: I have not tested your package with this new compat entry.
It is your responsibility to make sure that your package tests pass before you merge this pull request.

Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>

* CompatHelper: bump compat for AbstractPPL to 0.6 for package test, (keep existing compat)

---------

Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>
Co-authored-by: github-actions[bot] <compathelper_noreply@julialang.org>
Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com>
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