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63cb613
Fix bug in merge function of PermBase when taking single result. Now …
Mar 4, 2024
36a431e
NET53 ChordPlot Class (#5)
pollaro Mar 5, 2024
f30e7ca
Create export-mlapp-files.yml
pollaro Mar 5, 2024
6b2997c
NET-149 Save figures as svg (#6)
pollaro Mar 8, 2024
2a507ad
Switched to python and it works first try!
pollaro Mar 18, 2024
421f98b
Add Myers Dec2023 50 Pct Thresh Network Atlas
Mar 29, 2024
71a4930
Hotfix - Run edge/net perms together, don't save all edgePerm coeffs/…
Apr 3, 2024
e3cc37b
Update export-mlapp-files.yml
pollaro Apr 15, 2024
0be0727
Exported mlapp files
actions-user Apr 15, 2024
d368b9f
[NET-161] Remove "Import nla.*" from functions (#14)
pollaro Apr 25, 2024
b55394f
[NET-117] Network Test Refactor (#11)
pollaro Apr 26, 2024
fb713af
[NET-59] Better scaling options for TriMatrix plots (#12)
pollaro Apr 29, 2024
e854982
[NET-157] Enable colormap choice for TriMatrix (#13)
pollaro Apr 29, 2024
4025f7e
NET168 - Fix error in naming a variable in NetworkTestResult (#17)
pollaro May 6, 2024
97809db
NET-168 Welch's T (#18)
pollaro May 6, 2024
68d4756
fix typo
pollaro May 7, 2024
f646ba4
NET-173 - Glass Brain Images error (#19)
pollaro May 7, 2024
c8a17ae
NET174-Edge Chord Plots won't work (#20)
pollaro May 7, 2024
605a0ba
NET-167 Brain Visualization quick fix to show coeff (#21)
pollaro May 7, 2024
e839e13
[NET-176] Convergence Map Fix (#22)
pollaro May 8, 2024
c3e725f
Code monkey forgot to use parfor
pollaro May 10, 2024
84fcc5e
BugFix for selecting Precalculated in GUI: Add missing prefixes
May 13, 2024
1771633
NET-181 Fix permutation results in ResultPool (#23)
pollaro May 14, 2024
e9685ce
remove unneded folder
pollaro May 14, 2024
7cadc5e
NET179 - Cohen's D threshold fix and move (#24)
pollaro May 15, 2024
c7e8280
NET182 - Fix matrixplot scaling (#25)
pollaro May 15, 2024
8f75675
remove duplicate unittest folder
pollaro May 15, 2024
998e5e9
[NET-183] Flipped Colorbar choices around (#26)
pollaro May 20, 2024
f0b4377
Merge branch 'master' of https://github.com/WheelockLab/NetworkLevelA…
pollaro May 22, 2024
1c2061b
NET-188 Consolidate Plotters (#27)
pollaro May 22, 2024
450326f
fix stupid nla import
pollaro May 23, 2024
b4dcf89
NET190 - Hotfix for data handling (#28)
pollaro May 24, 2024
d4f22f0
NET184 - Save functionality fix (#29)
pollaro May 28, 2024
b74a990
Update Chi^2 calculation
arisegel00 Jun 3, 2024
5f80d94
correct chi squared test to account for multiply instead of divide
pollaro Jun 3, 2024
c3df8e7
[NET-192] Diagnostic Plot for permutation histogram fix (#31)
pollaro Jun 7, 2024
d3bf123
[NET-193] - Integrate Winkler Method and Westfall-Young method into N…
pollaro Jun 25, 2024
ba679c7
[NET-193] Fix for ResultRank tests (#40)
pollaro Jun 25, 2024
1a3757f
[NET-193] Fix denominator calc (#41)
pollaro Jun 26, 2024
f7ed501
fix cohensd
pollaro Jul 8, 2024
ea68401
Merge branch 'development' into NET196_cohend
pollaro Jul 8, 2024
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2 changes: 1 addition & 1 deletion +nla/+edge/+result/Base.m
Original file line number Diff line number Diff line change
Expand Up @@ -40,7 +40,7 @@ function output(obj, net_atlas, flags, prob_label)
matrix_plot.displayImage();
w = matrix_plot.image_dimensions("image_width");
h = matrix_plot.image_dimensions("image_height");

if ~isfield(flags, 'display_sig')
flags.display_sig = true;
end
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4 changes: 2 additions & 2 deletions +nla/+net/CohenDTest.m
Original file line number Diff line number Diff line change
Expand Up @@ -30,10 +30,10 @@
(std(edge_test_results.coeff.v).^2)));

result_object.no_permutations.d.set(row, column, single_sample_d);
if isprop(result_object, "full_connectome") && isequal(result_object.full_connectome, true)
if isprop(result_object, "full_connectome") && ~isequal(result_object.full_connectome, false)
result_object.full_connectome.d.set(row, column, d);
end
if isprop(result_object, "within_network_pair") && isequal(result_object.within_network_pair, true)
if isprop(result_object, "within_network_pair") && ~isequal(result_object.within_network_pair, false)
result_object.within_network_pair.d.set(row, column, single_sample_d);
end
end
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