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Feature/new database adds#497

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madeline-scyphers merged 3 commits intodevfrom
feature/new-database-adds
Apr 15, 2026
Merged

Feature/new database adds#497
madeline-scyphers merged 3 commits intodevfrom
feature/new-database-adds

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Add antiSMASH nextflow module, right now just collect antismash
raw output while we work on incorporating raw output into
larger pipeline
Add rgi nextflow module, right now like antiSMASH, only
collect raw output while we work on incorporating
ADD CARD db processing with mmseqs
ADD TCDB processing with mmseqs

Add DRAM team curated HMM database as new annotation db option.
Work in progress and testing database, but can be found on GLOBUS.

Add antiSMASH nextflow module, right now just collect antismash
raw output while we work on incorporating raw output into
larger pipeline
Add rgi nextflow module, right now like antiSMASH, only
collect raw output while we work on incorporating
ADD CARD db processing with mmseqs
ADD TCDB processing with mmseqs
Add DRAM team curated HMM database as new annotation db option.
Work in progress and testing database, but can be found on GLOBUS.
@madeline-scyphers madeline-scyphers added enhancement New feature or request database Anything to do with the database formatting, downloading, etc. labels Apr 15, 2026
@github-project-automation github-project-automation Bot moved this to To Sort in DRAM Apr 15, 2026
@madeline-scyphers madeline-scyphers merged commit 90dfef6 into dev Apr 15, 2026
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@github-project-automation github-project-automation Bot moved this from To Sort to Done in DRAM Apr 15, 2026
@madeline-scyphers madeline-scyphers deleted the feature/new-database-adds branch April 15, 2026 05:39
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database Anything to do with the database formatting, downloading, etc. enhancement New feature or request

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