Decompose option

decompose

decompose allow users to manually decompose their vcf files prior to annotation.
Decomposing vcf files allow remove multi-alleles (eg. REF-A ALT-T,C,GT) loci from vcf files to have a 'one variant per line' file.

Usage

python tapes.py decompose -i ./input.vcf -o ./output_decomposed.vcf

Credits

The decompose function is using the vcf_parser module.