Kegg pathways filtering

--kegg

Used to filter the main report based on functional kegg (Kyoto Encyclopedia of Genes and Genome) pathways.

usage:

python3 tapes.py sort -i ./input.vcf -o ./output_folder/ --kegg "fc epsilon ri signaling pathway"

By using the option --kegg with the sort or analyse option, a report containing only variants located in the genes contained in the designated pathway will be created.

A list of KEGG patwhays can be found here.
The format of this report will be identical to the main report.