LDetect-lite v0.2.3

What's Changed

• Make bitpacked covariance default and add benchmark figures by @adamyhe in #10
• MacDonald2022 reproduction diagnostics and parity fixes by @adamyhe in #11

Full Changelog: v0.2.2...v0.2.3

LDetect-lite v0.2.2

What's Changed

• Clean up package metadata and naming by @adamyhe in #9

Full Changelog: v0.2.1...v0.2.2

LDetect-lite v0.2.1

Remove dead bcftools-based VCF sample-reading helper + associated tests.

Full Changelog: v0.2.0...v0.2.1

LDetect-lite v0.2.0

What's Changed

• Added cyvcf2 and numba binary search by @adamyhe in #8

Full Changelog: v0.1.0...v0.2.0

LDetect-lite v0.1.0

Initial public alpha release.

What's Changed

• Add compact covariance pipeline optimizations and MacDonald/ldetect example workflows by @adamyhe in #1
• Many updates by @adamyhe in #2
• Memory optimizations by @adamyhe in #3
• Extensive diagnosis of issues in the LDetect pipeline. by @adamyhe in #4
• Updated testing and diagnostics on MacDonald 2022 replication by @adamyhe in #5
• Switch covariance HDF5 compression from lzf to zstd by @adamyhe in #6
• Macdonald by @adamyhe in #7

New Contributors

• @adamyhe made their first contribution in #1

Full Changelog: https://github.com/adamyhe/LDetect-lite/commits/v0.1.0