v0.6.1

What's Changed

[0.6.1] - 2026-03-18

Added

• Added a demo on map comparison
• Added colinear case when reading reactions (celldesigner)

CI/CD

• Bumped action versions

Changed

• Hid wip celldesigner writer
• Moved demos from demo to demos
• Moved utils to root (demo)
• Rearranged demo files
• Removed unnecessary re-export of reader (celldesigner io)

Documentation

• Moved demo to new paths and name

Fixed

• Replaced with correct apt deps (binder)
• Removed escaping brackets (binder)
• Model elements such as modulations are now mapped to the full set of layout elements (sbgn io)
• Removed >>> from examples
• User manual files after refactor
• Added skia extra dep to binder
• Updated the demo with latest refactors (demo)
• Fixed bug in coordinates of logic gate arcs (celldesigner)

Miscellaneous

• Updated reactome analysis with maps display (demos)
• Updated reactome analysis (demos)
• Added apt packages required for skia-python
• Simplified entries
• Updated deps
• Added jupyterlab dev dep
• Wip implement celldesigner writer
• Ruff formatting

Testing

• Fixed new paths (demo)

Installation

pip install momapy==0.6.1

Links

• Documentation
• PyPI