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Commits on Jan 20, 2025

• Merge branch 'main' of https://github.com/allaaamr/preprocessing

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• TCGA-02-0003

  allaaamr

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• sample

  

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Commits on Jan 19, 2025

• script for running pipiline on server

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Commits on Dec 28, 2024

• Merge pull request #102 from BrainLesion/101-standardized-issue-templates

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  neuronflow

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• hui

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Commits on Nov 27, 2024

• Merge pull request #98 from BrainLesion/97-defacing-is-missing-in-the-docs

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  neuronflow

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• Add defacing outputs to example

  MarcelRosier

  committed
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• Add defacing to docs

  MarcelRosier

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Commits on Nov 13, 2024

• Merge pull request #96 from BrainLesion/91-remove-example-data

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  neuronflow

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Commits on Nov 12, 2024

• we no longer have output files in the repo, as these are always changing with our ongoing development

  neuronflow

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• Merge pull request #95 from BrainLesion/94-ants-is-our-default-registrator-but-not-installed-by-default

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  neuronflow

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Commits on Nov 11, 2024

• Read warning

  MarcelRosier

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Commits on Nov 7, 2024

• Remove irrelevant warning

  MarcelRosier

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• Install antspyx by default

  MarcelRosier

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• Merge pull request #93 from BrainLesion/88-feature-request-allow-user-to-save-bet-and-defacing-masks

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  neuronflow

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Commits on Nov 6, 2024

• Update README.md

  neuronflow

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• Fix inconsistent naming

  MarcelRosier

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• Update README.md

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  neuronflow

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• Add mask outputs to example

  MarcelRosier

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• Simplify imports

  MarcelRosier

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• Add class docstrings for CenterModality

  MarcelRosier

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• Update example to use CenterModality

  MarcelRosier

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• Change warning to deprecation

  MarcelRosier

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• Update docs and add warning to sue center modality class

  MarcelRosier

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• Adding CenterModality subclass to allow elegantly saving masks

  MarcelRosier

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Commits on Oct 31, 2024

• Merge pull request #85 from BrainLesion/84-add-minimal-example-to-readme

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  neuronflow

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• Update example

  MarcelRosier

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• Merge branch 'main' into 84-add-minimal-example-to-readme

  MarcelRosier

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• Merge pull request #90 from yasinzaii/main

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  neuronflow

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• Corrected QuickshearDefacer argument name mismatch

  yasinzaii

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• Moved atlas_dir definition from Preprocessor class init fun to run_atlas_registration fun.

  yasinzaii

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Commits on Oct 28, 2024

• Moved Logging Configuration out of Preprocessor.py

  yasinzaii

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• Reformatted code using black to fix linting issues

  yasinzaii

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Commits on Oct 27, 2024

• Code Updates and Cleaning, Bux Fixes

  

  muhammadnabi.yasinzai

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  yasinzaii

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