INTRODUCTION:
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ls1 mardyn short description ...


INSTALLATION:
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To build mardyn with the default target using GNU compiler and MPI simply call 
make in the src directory. 

  cd src
  make

If you want to use another compiler, disable MPI, ... you can run

  make help

To see a list of all supported target platforms and compilers call

  make cfg_list

and run then make with the desired cofiguration:

  make CFG=<config name>

To display further information about the available suboptions for a configuration use

  make CFG=<cfg name> cfg_help


USAGE:
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The basic command to run ls1-mardyn is as follows:

MarDyn [options] <inputfile> <timesteps> [outputprefix]

where Mardyn is the executable build in the INSTALLATION section,
[options] are any -- prefixed options as listed by 'MarDyn --help'
<inputfile> is a input file
<timesteps> is the number of time steps to be executed in the simulation loop and
outputprefiy is an optional prefix for all result files

detailed help can be obtained by running 
MarDyn --help

example files can be found in the examples folder.

For example:

cd examples
mpirun -np 2 MarDyn lj40000_t300.cfg 100