New function mdtools.dtrj.trans_rate_tot to calculate the transition rates#211
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New function mdtools.dtrj.trans_rate_tot to calculate the transition rates#211
mdtools.dtrj.trans_rate_tot to calculate the transition rates#211Conversation
Create a new function `mdtools.dtrj.transition` that calculates the transition rate averaged over all compounds and over all states.
Refactor the function `mdtools.dtrj.trans_rate_tot`: * Add new argument `axis` that allows the user to specify the axis along which to search for state transitions. * If the argument `discard_all_neg` is `True`, calculate the total number of valued frames using the function `mdtools.dtrj.lifetimes`. * Add examples to the docstring.
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New function
mdtools.dtrj.trans_rate_totto calculate the transition ratesType of change
Proposed changes
Create a new function
mdtools.dtrj.transitionthat calculates the transition rate averaged over all compounds and over all states.PR checklist