Clinical trial Data Ingestion & Exploration

A unified repository for fetching, storing, and exploring clinical trial data from multiple sources.

Project Structure

• scripts/isrctn/: ISRCTN data ingestion pipeline and database management.
• scripts/ctgov/: AACT (ClinicalTrials.gov) database management.
• database/: SQL schemas for integrated trial repositories.

Installation

Ensure you have uv installed, then set up the environment:

uv sync

AACT (ClinicalTrials.gov) Setup

For detailed setup and usage instructions for the ClinicalTrials.gov database creation and management, see the CTGov README.

ISRCTN Pipeline

For detailed setup and usage instructions for the ISRCTN ingestion pipeline, see the ISRCTN README.