ORC-626: Reading Struct Column Having Multiple Fields With Same Name Causes java.io.EOFException#505
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…Causes java.io.EOFException Fixes #505 Signed-off-by: Owen O'Malley <omalley@apache.org>
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…Causes java.io.EOFException Fixes #505 Signed-off-by: Owen O'Malley <omalley@apache.org>
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Bumps [org.apache.commons:commons-csv](https://github.com/apache/commons-csv) from 1.12.0 to 1.13.0. <details> <summary>Changelog</summary> <p><em>Sourced from <a href="https://github.com/apache/commons-csv/blob/master/RELEASE-NOTES.txt">org.apache.commons:commons-csv's changelog</a>.</em></p> <blockquote> <p>Apache Commons CSV Version 1.13.0 Release Notes</p> <p>This document contains the release notes for the 1.13.0 version of Apache Commons CSV. Commons CSV reads and writes files in variations of the Comma Separated Value (CSV) format.</p> <p>Commons CSV requires at least Java 8.</p> <p>The Apache Commons CSV library provides a simple interface for reading and writing CSV files of various types.</p> <p>This is a feature and maintenance release. Java 8 or later is required.</p> <p>Changes in this version include:</p> <h2>New Features</h2> <ul> <li>CSV-313: Add CSVPrinter.getRecordCount(). Thanks to Gary Gregory.</li> <li> <pre><code> Add and use CSVParser.Builder and builder() and deprecate CSVParser constructors. Thanks to Gary Gregory. </code></pre> </li> <li> <pre><code> CSVFormat.Builder implements Supplier<CSVFormat>. Thanks to Gary Gregory. </code></pre> </li> <li> <pre><code> Deprecate CSVFormat.Builder.build() for get(). Thanks to Gary Gregory. </code></pre> </li> <li>CSV-196: Track byte position <a href="https://redirect.github.com/apache/commons-csv/issues/502">#502</a>. Thanks to Yuzhan Jiang, Gary Gregory.</li> </ul> <h2>Fixed Bugs</h2> <ul> <li>CSV-314: Required OSGi Import-Package version numbers in MANIFEST.MF <a href="https://redirect.github.com/apache/commons-csv/issues/504">#504</a>. Thanks to Gary Gregory.</li> <li>CSV-314: CSVParser.nextRecord() should throw CSVException (an IOException subclass) instead of IOException and IllegalStateException, no method signature changes needed. Thanks to Gary Gregory.</li> </ul> <h2>Changes</h2> <ul> <li> <pre><code> Bump org.apache.commons:commons-parent from 76 to 78 [#486](apache/commons-csv#486), [#495](apache/commons-csv#495). Thanks to Gary Gregory, Dependabot. </code></pre> </li> <li> <pre><code> Bump org.codehaus.mojo:taglist-maven-plugin from 3.1.0 to 3.2.1 [#493](apache/commons-csv#493). Thanks to Gary Gregory, Dependabot. </code></pre> </li> <li> <pre><code> Bump commons-io:commons-io from 2.17.0 to 2.18.0 [#505](apache/commons-csv#505). Thanks to Gary Gregory, Dependabot. </code></pre> </li> <li> <pre><code> Bump commons-codec:commons-codec from 1.17.1 to 1.17.2. Thanks to Gary Gregory. </code></pre> </li> <li> <pre><code> Bump org.apache.commons:commons-parent from 78 to 79. Thanks to Gary Gregory. </code></pre> </li> </ul> <p>Historical list of changes: <a href="https://commons.apache.org/proper/commons-csv/changes-report.html">https://commons.apache.org/proper/commons-csv/changes-report.html</a></p> <p>For complete information on Apache Commons CSV, including instructions on how to submit bug reports, patches, or suggestions for improvement, see the Apache Commons CSV website:</p> <p><a href="https://commons.apache.org/proper/commons-csv/">https://commons.apache.org/proper/commons-csv/</a></p> <p>Download page: <a href="https://commons.apache.org/proper/commons-csv/download_csv.cgi">https://commons.apache.org/proper/commons-csv/download_csv.cgi</a></p> <p>Have fun! -Apache Commons CSV team</p> </blockquote> <p>... (truncated)</p> </details> <details> <summary>Commits</summary> <ul> <li><a href="https://github.com/apache/commons-csv/commit/f2f1cffe53cde4b36623403bdc27855cec01fac2"><code>f2f1cff</code></a> Prepare for the next release candidate</li> <li><a href="https://github.com/apache/commons-csv/commit/732c2f8b1ce031384e63e0594cc16a2945528891"><code>732c2f8</code></a> Prepare for the next release candidate</li> <li><a href="https://github.com/apache/commons-csv/commit/02b398d33f9c4f0b94f8554586d68394315f9cd5"><code>02b398d</code></a> Add Checstyle UnnecessaryParentheses</li> <li><a href="https://github.com/apache/commons-csv/commit/947c514bd2183e438d9334aac8b8b506bac6ec11"><code>947c514</code></a> Add Checstyle SuperFinalize</li> <li><a href="https://github.com/apache/commons-csv/commit/4579bd3be81495965c11c756ae1480b42998c6fa"><code>4579bd3</code></a> Add Checstyle SuperClone</li> <li><a href="https://github.com/apache/commons-csv/commit/a0ff618877365a6694e8a1e0ede80d0b85df7894"><code>a0ff618</code></a> Add Checstyle StringLiteralEquality</li> <li><a href="https://github.com/apache/commons-csv/commit/f69526c8f10d8aae6cd094f45ac67132e5d3b6ed"><code>f69526c</code></a> Add Checstyle SimplifyBooleanReturn</li> <li><a href="https://github.com/apache/commons-csv/commit/81f90443d84112637f967226ebfda99983b65011"><code>81f9044</code></a> Add Checstyle SimplifyBooleanExpression</li> <li><a href="https://github.com/apache/commons-csv/commit/6afa33cde8039a1233568a1ede5ff0de2cf07e41"><code>6afa33c</code></a> Add Checstyle MultipleVariableDeclarations</li> <li><a href="https://github.com/apache/commons-csv/commit/114118c00f8e4e918d639c72ada6c213c7ee3d2d"><code>114118c</code></a> Add Checstyle IllegalInstantiation</li> <li>Additional commits viewable in <a href="https://github.com/apache/commons-csv/compare/rel/commons-csv-1.12.0...rel/commons-csv-1.13.0">compare view</a></li> </ul> </details> <br /> [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting `dependabot rebase`. [//]: # (dependabot-automerge-start) [//]: # (dependabot-automerge-end) --- <details> <summary>Dependabot commands and options</summary> <br /> You can trigger Dependabot actions by commenting on this PR: - `dependabot rebase` will rebase this PR - `dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `dependabot merge` will merge this PR after your CI passes on it - `dependabot squash and merge` will squash and merge this PR after your CI passes on it - `dependabot cancel merge` will cancel a previously requested merge and block automerging - `dependabot reopen` will reopen this PR if it is closed - `dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `dependabot show <dependency name> ignore conditions` will show all of the ignore conditions of the specified dependency - `dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself) </details> Closes #2111 from dependabot[bot]/dependabot/maven/java/org.apache.commons-commons-csv-1.13.0. Authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Signed-off-by: Shaoyun Chen <csy@apache.org>
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Steps To Repro In Hive:
`set hive.fetch.task.conversion=none;
set orc.force.positional.evolution=true;
create table complex_orc(device struct<a:string,a:string,b:string>) stored as orc;
insert into complex_orc select named_struct("a","123","a","823","b","23");
select * from complex_orc;`
Fails with the following exception:
Caused by: java.io.EOFException: Read past end of RLE integer from compressed stream Stream for column 3 kind LENGTH position: 6 length: 6 range: 0 offset: 16 limit: 16 range 0 = 0 to 6 uncompressed: 3 to 3 at org.apache.orc.impl.RunLengthIntegerReaderV2.readValues(RunLengthIntegerReaderV2.java:61) at org.apache.orc.impl.RunLengthIntegerReaderV2.next(RunLengthIntegerReaderV2.java:323) at org.apache.orc.impl.RunLengthIntegerReaderV2.nextVector(RunLengthIntegerReaderV2.java:369) at org.apache.orc.impl.TreeReaderFactory$BytesColumnVectorUtil.commonReadByteArrays(TreeReaderFactory.java:1299) at org.apache.orc.impl.TreeReaderFactory$BytesColumnVectorUtil.readOrcByteArrays(TreeReaderFactory.java:1336) at org.apache.orc.impl.TreeReaderFactory$StringDirectTreeReader.nextVector(TreeReaderFactory.java:1434) at org.apache.orc.impl.TreeReaderFactory$StringTreeReader.nextVector(TreeReaderFactory.java:1280) at org.apache.orc.impl.TreeReaderFactory$StructTreeReader.nextVector(TreeReaderFactory.java:1836) at org.apache.orc.impl.TreeReaderFactory$StructTreeReader.nextBatch(TreeReaderFactory.java:1818) at org.apache.orc.impl.RecordReaderImpl.nextBatch(RecordReaderImpl.java:1149)This is caused due to ORC-54 where schema evolution was done based on field names rather than index. Setting orc.force.positional.evolution will force to do a positional schema evolution but the positional level is hardcoded to 1 (for non acid). Even though it doesn't make sense to have multiple fields with same name in in struct, It breaks the backward compatibly with hive 1.2 / hive2.1.