HDDS-13930. Snapshot diff can use rocksdb iterator instead of using multiple gets #9317

swamirishi · 2025-11-18T04:33:23Z

What changes were proposed in this pull request?

After HDDS-13005 all keys returned by SstFileSetReader is going to be monotonically sorted increasing order thus using rocksdbIterator for getting the keys would be more optimzed than doing multiple gets.
This is built on #9313

What is the link to the Apache JIRA

https://issues.apache.org/jira/browse/HDDS-13930

How was this patch tested?

Added unit tests

Change-Id: Iba47aeb21663dfa407ab71339cef02c0d74b49f2

Change-Id: Ifd2feca1fddb144e4955db025f0b15a2ab1f3bfe

Change-Id: I34536ff06efb7d5a4942853f0fd83942ab398b5f

…otLocalDataManager Change-Id: I34536ff06efb7d5a4942853f0fd83942ab398b5f

Change-Id: I32bcaf2a1fb290f1790c02872a0230cd65586636

Change-Id: I105a2e8178c0444d52de41b99801f4ceb6d57ffd # Conflicts: # hadoop-hdds/common/src/main/java/org/apache/hadoop/ozone/util/Checksum.java # hadoop-hdds/common/src/main/java/org/apache/hadoop/ozone/util/ObjectSerializer.java # hadoop-hdds/common/src/main/java/org/apache/hadoop/ozone/util/YamlSerializer.java # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/OmSnapshotLocalDataYaml.java # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/OmSnapshotLocalDataManager.java # hadoop-ozone/ozone-manager/src/test/java/org/apache/hadoop/ozone/om/TestOmSnapshotLocalDataYaml.java

Change-Id: I985170e38fb8beeb784048e85a08a4c79e1aec97

Change-Id: I33e6e6e825bf23c323ad7ed593d800a11720fa4f

Change-Id: If30b2c766db82adde72145c8ecd3e590ef54cc2d

Change-Id: Id3f2c49050bc3476b9e0f5f51dacb6d9acc4c2f7

Change-Id: I432960725b4c6c55aa906b5780cc3027e41e10db

Change-Id: I3c5514e5bbd251a2b5297d8f074cfde5c71fa543

Change-Id: Ib5a9e6c91bdccba17820263c47eaf2c8400e930d

Change-Id: Ica36e0615c7bc6aa9b6a7f6fafafd0f830d4bafb

Change-Id: I26b66f266bb7677e4b1078f5fcd9f2ce3a651a70 # Conflicts: # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/OmSnapshotLocalDataManager.java

Change-Id: I1d93dbc048a42cc55ff1f8ffa420e52f967527b8

Change-Id: I34202928a7a367dd0a1e57219317ff34de352b78

Change-Id: Iad6f26cb71ec921c51ee2d138745df1a2663533f

Change-Id: Ic5f7e249cfb9cb3973cbcd4abd36b22a6ff8f5aa

…calDataProvider Change-Id: I3a004b4b435075a4348960aeed642e8da71e7e72

Change-Id: I06990bc9ab8fc7e1eb7bec255646a650bd8c35fe

Change-Id: I4c6c61c83aa9fadab8ecef854b99dcc0a89a2208

Change-Id: I0e476322372a302572f1fe79cbf2e874bfeac2ed

Change-Id: I31004e0c95dad64411c6fe848501a82f2f773cba

Change-Id: Id317c8b56e8b25c122b68eaf96599b9690d08f79

Change-Id: I3849387d064e093634e69cdaf870d27c1934cda5 # Conflicts: # hadoop-hdds/common/src/main/java/org/apache/hadoop/ozone/util/ObjectSerializer.java # hadoop-hdds/common/src/main/java/org/apache/hadoop/ozone/util/YamlSerializer.java # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/OmSnapshotLocalData.java # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/OmSnapshotLocalDataYaml.java # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/OmSnapshotManager.java # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/OmSnapshotLocalDataManager.java

Change-Id: Ie5e5f3dab4324103e8855dd15619d7755f0422e6

Change-Id: I55bd5c3ef7fc32910a9111328638de2edffcd541

Change-Id: I880997d3eebdf378f14c203c61c2d63b2d17552e

Change-Id: I13ba8e2fd012a3c964d657e83496c93a4f55a3be

Change-Id: I41308fd260de2e7ecdd8e8318e2155096212b687

Change-Id: Ie607809e088aee642940f72fdd12a258a06cc96d # Conflicts: # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/OmSnapshotLocalDataManager.java

Change-Id: Ifb7f696c2ec859786286bf0545e6039c2b70b2ba

Change-Id: Ie464f0ed154e8911024dbe7802338e11a83f502a

Change-Id: I8abb7a9db2e595f0cf2a0d257cb38caaacec6e1f

Change-Id: I0533a4a3869ad0beb04d3f22f835985ee7d2982e

Change-Id: I09301ff17cf3c8abab5785d25336c7633f8ac293

Change-Id: Iddd5315532d35ed853f518daa77e0fa96dd5f2c0

Change-Id: I3e885ef24c95280ea0acccaf44787bd295aedbe4 # Conflicts: # hadoop-hdds/common/src/main/java/org/apache/hadoop/hdds/utils/IOUtils.java # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/diff/delta/DeltaFileComputer.java # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/diff/delta/FileLinkDeltaFileComputer.java

Change-Id: I6ae5c5897f9ca8580ba68b17ad77dffa35dfafb6

Change-Id: Ib6089c9c7d8c787edd75721234d94d1ea0eb88c9

Change-Id: Idbf1d64b72ff4a8c80b2da8515639e430cef895c

Change-Id: I83a10d188f4764ef0646d4c19d0b2bf4cdcc82ee

adoroszlai · 2025-11-19T17:45:32Z

Please rebase on top of master.

Change-Id: Ie968331ba23db3ae33ca421599a75ead35076d48 # Conflicts: # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/diff/delta/RDBDifferComputer.java # hadoop-ozone/ozone-manager/src/test/java/org/apache/hadoop/ozone/om/snapshot/diff/delta/TestCompositeDeltaDiffComputer.java # hadoop-ozone/ozone-manager/src/test/java/org/apache/hadoop/ozone/om/snapshot/diff/delta/TestRDBDifferComputer.java

Change-Id: I227cf7471e5235204926fb5f48c754516222fc30

Change-Id: I1d292144717589327756b737f8749085fa0e0213

Change-Id: I80d2de61eaf6f507509534ee834a5dbe44ae85b6 # Conflicts: # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/OmSnapshotLocalData.java

Change-Id: I9dda0e6410d430cbf060cf97b6dbefb3710f29cf

swamirishi · 2025-11-20T20:22:07Z

@jojochuang & @smengcl this can reviewed as I merged and rebased the dependent PR

Copilot

Pull request overview

This PR optimizes snapshot diff operations by replacing multiple RocksDB get() calls with efficient iterator-based traversal. Since HDDS-13005 guarantees that keys from SstFileSetReader are returned in monotonically sorted order, using RocksDB iterators for lookups is more efficient than performing individual get operations.

Key Changes:

Introduced TableMergeIterator to merge and filter data from multiple tables using iterators instead of individual lookups
Changed SstFileSetReader API from Stream<String> to ClosableIterator<String> for better resource management and integration with iterator-based processing
Removed isKeyInBucket filtering logic from SnapshotDiffManager.addToObjectIdMap() by leveraging prefix-based table iteration

Reviewed changes

Copilot reviewed 9 out of 9 changed files in this pull request and generated 3 comments.

Show a summary per file

File	Description
TableMergeIterator.java	New utility class that merges multiple table iterators and filters by keys, enabling efficient multi-table lookups using seek operations
TestTableMergeIterator.java	Comprehensive unit tests for TableMergeIterator covering edge cases including null keys, empty tables, and large datasets
package-info.java	Package documentation for the new snapshot.util package
SnapshotDiffManager.java	Refactored addToObjectIdMap() to use TableMergeIterator instead of individual get() calls; removed isKeyInBucket check as filtering is now done at the iterator level
TestSnapshotDiffManager.java	Updated test to use StringInMemoryTestTable and modified key generation to include bucket prefix for iterator-based filtering
SstFileSetReader.java	Changed return type from Stream to ClosableIterator for getKeyStream() and getKeyStreamWithTombstone(); removed getStreamFromIterator() helper method
TestSstFileSetReader.java	Updated tests to use ClosableIterator with while loops instead of Stream forEach patterns
InMemoryTestTable.java	Added name field and new constructors to support table naming in tests
StringInMemoryTestTable.java	Added constructors for Map initialization and table naming to support improved testing infrastructure

Comments suppressed due to low confidence (1)

hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/util/TableMergeIterator.java:80

Variable key may be null at this access as suggested by this null guard.

    if (itr.hasNext() && (kvs.get(index) == null || key.compareTo(kvs.get(index).getKey()) > 0)) {

💡 Add Copilot custom instructions for smarter, more guided reviews. Learn how to get started.

Copilot · 2025-11-21T20:23:16Z

...ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/util/TableMergeIterator.java

+
+  private V updateAndGetValueAtIndex(K key, int index) {
+    Table.KeyValueIterator<K, V> itr = itrs[index];
+    if (itr.hasNext() && (kvs.get(index) == null || key.compareTo(kvs.get(index).getKey()) > 0)) {


Potential NullPointerException when key is null. The condition key.compareTo(kvs.get(index).getKey()) > 0 will throw NPE if key is null, even though line 90 checks for null. The null check should be performed before any method calls on key.

Consider changing line 80 to:

if (itr.hasNext() && (kvs.get(index) == null || (key != null && key.compareTo(kvs.get(index).getKey()) > 0))) {

Suggested change

if (itr.hasNext() && (kvs.get(index) == null || key.compareTo(kvs.get(index).getKey()) > 0)) {

if (itr.hasNext() && (kvs.get(index) == null || (key != null && key.compareTo(kvs.get(index).getKey()) > 0))) {

key can never be null. If it is null then it would fetch wrong results

Copilot · 2025-11-21T20:23:16Z

hadoop-hdds/framework/src/test/java/org/apache/hadoop/hdds/utils/db/InMemoryTestTable.java

+
+  public InMemoryTestTable(Map<KEY, VALUE> map, String name) {
    this.map = new ConcurrentSkipListMap<>(map);
    this.map.putAll(map);


Redundant putAll operation. The constructor new ConcurrentSkipListMap<>(map) already copies all entries from the input map, so calling this.map.putAll(map) on line 49 duplicates the same entries unnecessarily.

Consider removing line 49:

public InMemoryTestTable(Map<KEY, VALUE> map, String name) { this.map = new ConcurrentSkipListMap<>(map); this.name = name; }

Suggested change

this.map.putAll(map);

Code change unrelated to PR

Copilot · 2025-11-21T20:23:17Z

...ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/util/TableMergeIterator.java

+  }
+
+  /**
+   * Gets the next key and corresponding values from all tables. Note: the values array returned is not Immutable and


Documentation inconsistency: The comment says "values array" but the return type is List<V>, not an array. Also, "Immutable" should be lowercase "immutable" since it refers to a property, not a type name.

Suggested fix:

/** * Gets the next key and corresponding values from all tables. Note: the values list returned is not immutable and * will be modified on the next call to next(). * @return KeyValue containing the next key and corresponding values from all tables. The value would be null if * the key is not present in that table otherwise the value from that table corresponding to the next key. */

Suggested change

* Gets the next key and corresponding values from all tables. Note: the values array returned is not Immutable and

* Gets the next key and corresponding values from all tables. Note: the values list returned is not immutable and

jojochuang

Small code style suggestions but overall looks fine to me.
Though not sure how much difference does it make performance wise.

jojochuang · 2025-11-21T20:59:24Z

...one/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/SnapshotDiffManager.java

          if (fromObjectId != null) {
-            byte[] rawObjId = codecRegistry.asRawData(
-                fromObjectId.getObjectID());
+            byte[] rawObjId = codecRegistry.asRawData(fromObjectId.getObjectID());
            // Removing volume bucket info by removing the table bucket Prefix
            // from the key.
            // For FSO buckets will be left with the parent id/keyname.
            // For OBS buckets will be left with the complete path
            byte[] rawValue = codecRegistry.asRawData(
                key.substring(tablePrefix.length()));
            oldObjIdToKeyMap.put(rawObjId, rawValue);
            objectIdToIsDirMap.put(rawObjId, isDirectoryTable);
            oldParentIds.ifPresent(set -> set.add(
                fromObjectId.getParentObjectID()));
          }
          if (toObjectId != null) {
            byte[] rawObjId = codecRegistry.asRawData(toObjectId.getObjectID());
-            byte[] rawValue = codecRegistry.asRawData(
-                key.substring(tablePrefix.length()));
+            byte[] rawValue = codecRegistry.asRawData(key.substring(tablePrefix.length()));
            newObjIdToKeyMap.put(rawObjId, rawValue);
            objectIdToIsDirMap.put(rawObjId, isDirectoryTable);
            newParentIds.ifPresent(set -> set.add(toObjectId
                .getParentObjectID()));
          }


Duplicate code fragments
Line 1061 - 1073 vs Line 1074 - 1081.

I didn't want make logical code changes here. Just want to keep it the same

swamirishi · 2025-11-21T21:48:07Z

Small code style suggestions but overall looks fine to me. Though not sure how much difference does it make performance wise.

This would make a difference avoiding a lot of seeks. In this we are always doing forward seeks in iterator since keys would be always in a sorted order

jojochuang

LGTM. @swamirishi feel free to merge as is.

swamirishi · 2025-11-22T00:24:03Z

Thanks you for reviewing the patch @jojochuang

swamirishi added 30 commits October 8, 2025 09:39

HDDS-13765. SnapshotLocalData yaml should also track snapshotId

6e241f6

Change-Id: Iba47aeb21663dfa407ab71339cef02c0d74b49f2

HDDS-13627. In memory Manager for Snapshot Local Data

a869500

Change-Id: Ifd2feca1fddb144e4955db025f0b15a2ab1f3bfe

HDDS-13627. In memory Manager for Snapshot Local Data

252d338

Change-Id: I34536ff06efb7d5a4942853f0fd83942ab398b5f

HDDS-13767. Refactor SnapshotLocalDataYaml related code into OmSnapsh…

4099bc6

…otLocalDataManager Change-Id: I34536ff06efb7d5a4942853f0fd83942ab398b5f

HDDS-13767. Fix pmd

e02670c

Change-Id: I32bcaf2a1fb290f1790c02872a0230cd65586636

HDDS-13627. Fix checkstyle

79580e9

Change-Id: I985170e38fb8beeb784048e85a08a4c79e1aec97

Merge remote-tracking branch 'apache/master' into HEAD

2a331ef

Change-Id: I33e6e6e825bf23c323ad7ed593d800a11720fa4f

Merge remote-tracking branch 'apache/master' into HEAD

c4f69e2

Change-Id: If30b2c766db82adde72145c8ecd3e590ef54cc2d

HDDS-13627. Add tests

afbc592

Change-Id: Id3f2c49050bc3476b9e0f5f51dacb6d9acc4c2f7

HDDS-13783. Implement locks for OmSnapshotLocalDataManager

70ac2c7

Change-Id: I432960725b4c6c55aa906b5780cc3027e41e10db

HDDS-13783. Implement locks for OmSnapshotLocalDataManager

b554cc7

Change-Id: I3c5514e5bbd251a2b5297d8f074cfde5c71fa543

HDDS-13783. Refactor inline variable

49eccfa

Change-Id: Ib5a9e6c91bdccba17820263c47eaf2c8400e930d

HDDS-13627. Refactor map data structure

51eda04

Change-Id: Ica36e0615c7bc6aa9b6a7f6fafafd0f830d4bafb

Merge remote-tracking branch 'origin/HDDS-13627' into HEAD

25f766c

Change-Id: I26b66f266bb7677e4b1078f5fcd9f2ce3a651a70 # Conflicts: # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/OmSnapshotLocalDataManager.java

HDDS-13783. Add more condition to upsert

96689fa

Change-Id: I1d93dbc048a42cc55ff1f8ffa420e52f967527b8

HDDS-13783. Add java doc comment

0674299

Change-Id: I34202928a7a367dd0a1e57219317ff34de352b78

HDDS-13783. Add java doc comment

5d9fc49

Change-Id: Iad6f26cb71ec921c51ee2d138745df1a2663533f

HDDS-13783. Implement full lock

2d88176

Change-Id: Ic5f7e249cfb9cb3973cbcd4abd36b22a6ff8f5aa

HDDS-13783. Refactor and move modify method into WritableOmSnapshotLo…

a3c4c69

…calDataProvider Change-Id: I3a004b4b435075a4348960aeed642e8da71e7e72

HDDS-13783. Make full lock non static

686d0c7

Change-Id: I06990bc9ab8fc7e1eb7bec255646a650bd8c35fe

HDDS-13783. Fix remove

491a54b

Change-Id: I4c6c61c83aa9fadab8ecef854b99dcc0a89a2208

HDDS-13627. Fix findbugs

5e69ee9

Change-Id: I0e476322372a302572f1fe79cbf2e874bfeac2ed

HDDS-13785. Remove orphan versions from SnapshotLocalData Yaml file

d36622a

Change-Id: I31004e0c95dad64411c6fe848501a82f2f773cba

HDDS-13785. Fix findbugs

ee213d1

Change-Id: Id317c8b56e8b25c122b68eaf96599b9690d08f79

HDDS-13627. Fix tests

a95604e

Change-Id: Ie5e5f3dab4324103e8855dd15619d7755f0422e6

HDDS-13627. remove checksum interface

5a90fcf

Change-Id: I55bd5c3ef7fc32910a9111328638de2edffcd541

HDDS-13627. Fix test failures

20d7d6a

Change-Id: I880997d3eebdf378f14c203c61c2d63b2d17552e

HDDS-13785. Set defrag flag on previous snapshotId update

ae655cb

Change-Id: I13ba8e2fd012a3c964d657e83496c93a4f55a3be

swamirishi added 13 commits November 18, 2025 08:55

Merge remote-tracking branch 'origin/HDDS-13912' into HEAD

ecb5084

Change-Id: I41308fd260de2e7ecdd8e8318e2155096212b687

Merge remote-tracking branch 'origin/HDDS-13929' into HEAD

632c009

Change-Id: Ie607809e088aee642940f72fdd12a258a06cc96d # Conflicts: # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/snapshot/OmSnapshotLocalDataManager.java

Merge remote-tracking branch 'origin/HDDS-13949' into HEAD

d044ad8

Change-Id: Ifb7f696c2ec859786286bf0545e6039c2b70b2ba

HDDS-13929. Fix javadoc

1201350

Change-Id: Ie464f0ed154e8911024dbe7802338e11a83f502a

Merge remote-tracking branch 'origin/HDDS-13929' into HEAD

505d6c5

Change-Id: I8abb7a9db2e595f0cf2a0d257cb38caaacec6e1f

Merge remote-tracking branch 'origin/HDDS-13949' into HEAD

2f5c5c7

Change-Id: I0533a4a3869ad0beb04d3f22f835985ee7d2982e

HDDS-13949. Add back snapshotPath init removed by mistake

edf0213

Change-Id: I09301ff17cf3c8abab5785d25336c7633f8ac293

Merge remote-tracking branch 'origin/HDDS-13949' into HEAD

8aa35bb

Change-Id: Iddd5315532d35ed853f518daa77e0fa96dd5f2c0

HDDS-13929. Fix comment

42ca3d7

Change-Id: I6ae5c5897f9ca8580ba68b17ad77dffa35dfafb6

HDDS-13929. Change error log to warn

faa1380

Change-Id: Ib6089c9c7d8c787edd75721234d94d1ea0eb88c9

Merge remote-tracking branch 'origin/HDDS-13929' into HEAD

d3f3836

Change-Id: Idbf1d64b72ff4a8c80b2da8515639e430cef895c

Merge remote-tracking branch 'origin/HDDS-13949' into HEAD

f489860

Change-Id: I83a10d188f4764ef0646d4c19d0b2bf4cdcc82ee

swamirishi added 5 commits November 19, 2025 21:47

HDDS-13949. Address review comments from HDDS-13929

4a36e98

Change-Id: I227cf7471e5235204926fb5f48c754516222fc30

Merge remote-tracking branch 'origin/HDDS-13949' into HEAD

140af62

Change-Id: I1d292144717589327756b737f8749085fa0e0213

Merge remote-tracking branch 'apache/master' into HEAD

124810f

Change-Id: I80d2de61eaf6f507509534ee834a5dbe44ae85b6 # Conflicts: # hadoop-ozone/ozone-manager/src/main/java/org/apache/hadoop/ozone/om/OmSnapshotLocalData.java

Merge remote-tracking branch 'apache/master' into HEAD

91f727c

Change-Id: I9dda0e6410d430cbf060cf97b6dbefb3710f29cf

jojochuang requested a review from Copilot November 21, 2025 20:15

Copilot started reviewing on behalf of jojochuang November 21, 2025 20:15 View session

Copilot finished reviewing on behalf of jojochuang November 21, 2025 20:19

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swamirishi marked this pull request as ready for review November 21, 2025 22:54

jojochuang approved these changes Nov 22, 2025

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swamirishi merged commit fd3cb67 into apache:master Nov 22, 2025
61 checks passed

	if (itr.hasNext() && (kvs.get(index) == null \|\| key.compareTo(kvs.get(index).getKey()) > 0)) {
	if (itr.hasNext() && (kvs.get(index) == null \|\| (key != null && key.compareTo(kvs.get(index).getKey()) > 0))) {

	* Gets the next key and corresponding values from all tables. Note: the values array returned is not Immutable and
	* Gets the next key and corresponding values from all tables. Note: the values list returned is not immutable and

HDDS-13930. Snapshot diff can use rocksdb iterator instead of using multiple gets #9317

HDDS-13930. Snapshot diff can use rocksdb iterator instead of using multiple gets #9317

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What is the link to the Apache JIRA

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