Streamlit app to generate Enterosignature weights from GTDB abundance tables.
entero_process.py can be used a standalone command line script to generate
Enterosignature weights, and does not import the streamlit module.
Currently only the 5 Enterosignatures module from Frioux et al. 2023 (doi:10.1016/j.chom.2023.05.024) is provided, but the commandline is able to take other matrices.
The streamlit app is available at https://enterosignatures.streamlit.app
There are some features yet to be added:
- Option to upload hard mapping file in Streamlit
- Option to skip plots in output if just want files