Skip to content

Update milestone information#104

Merged
jonthegeek merged 5 commits into
mainfrom
readme-0.5
May 18, 2026
Merged

Update milestone information#104
jonthegeek merged 5 commits into
mainfrom
readme-0.5

Conversation

@jonthegeek
Copy link
Copy Markdown
Collaborator

@jonthegeek jonthegeek commented May 18, 2026 •
edited
Loading

Move the specifics about grant milestones into a new milestons.Rmd vignette, and update the README toward v0.5.0 release.

I also removed NEWS.md (and references to it) for now, since it isn't really meaningful until the first official release.

Closes #87.

jonthegeek added 2 commits May 18, 2026 09:10
@jonthegeek
Update milestone information
e82aea5 
Move the specifics about grant milestones into a new `milestons.Rmd` vignette, and update the README toward v0.5.0 release.

Closes #87.
@jonthegeek
Remove NEWS.md until closer to CRAN.
2c313d5
@github-actions
Copy link
Copy Markdown

github-actions Bot commented May 18, 2026 •
edited
Loading

{qcthat} Report: User Acceptance

No issues are awaiting UAT.

This report was generated by this GitHub Actions run.

Last updated: 2026-05-18 14:41:24 UTC

Session Info ─ Session info ───────────────────────────────────────────────────────────────

setting value

version R version 4.6.0 (2026-04-24)

os Ubuntu 24.04.4 LTS

system x86_64, linux-gnu

ui X11

language (EN)

collate en_US.UTF-8

ctype en_US.UTF-8

tz UTC

date 2026-05-18

pandoc 3.1.3 @ /usr/bin/pandoc

quarto NA

─ Packages ───────────────────────────────────────────────────────────────────

package * version date (UTC) lib source

askpass 1.2.1 2024-10-04 [1] RSPM

astgrepr 0.1.1 2025-06-07 [1] RSPM

backports 1.5.1 2026-04-03 [1] RSPM

base * 4.6.0 2026-04-24 [2] local

base64enc 0.1-6 2026-02-02 [1] RSPM

beekeeper 0.4.0.9000 2026-05-18 [1] local

boot 1.3-32 2025-08-29 [2] CRAN (R 4.6.0)

brew 1.0-10 2023-12-16 [1] RSPM

brio 1.1.5 2024-04-24 [1] RSPM

bslib 0.11.0 2026-05-16 [1] RSPM

cachem 1.1.0 2024-05-16 [1] RSPM

callr 3.7.6 2024-03-25 [1] RSPM

checkmate 2.3.4 2026-02-03 [1] RSPM

class 7.3-23 2025-01-01 [2] CRAN (R 4.6.0)

cli 3.6.6 2026-04-09 [1] RSPM

clipr 0.8.0 2022-02-22 [1] RSPM

cluster 2.1.8.2 2026-02-05 [2] CRAN (R 4.6.0)

codetools 0.2-20 2024-03-31 [2] CRAN (R 4.6.0)

commonmark 2.0.0 2025-07-07 [1] RSPM

compiler 4.6.0 2026-04-24 [2] local

covr 3.6.5 2025-11-09 [1] RSPM

crayon 1.5.3 2024-06-20 [1] RSPM

credentials 2.0.3 2025-09-12 [1] RSPM

curl 7.1.0 2026-04-22 [1] RSPM

datasets * 4.6.0 2026-04-24 [2] local

desc 1.4.3 2023-12-10 [1] RSPM

devtools 2.5.2 2026-04-30 [1] RSPM

diffobj 0.3.6 2025-04-21 [1] RSPM

digest 0.6.39 2025-11-19 [1] RSPM

docopt 0.7.2 2025-03-25 [1] RSPM (R 4.6.0)

downlit 0.4.5 2025-11-14 [1] RSPM

dplyr 1.2.1 2026-04-03 [1] RSPM

ellipsis 0.3.3 2026-04-04 [1] RSPM

emoji 16.0.0 2024-10-28 [1] RSPM

evaluate 1.0.5 2025-08-27 [1] RSPM

fansi 1.0.7 2025-11-19 [1] RSPM

fastmap 1.2.0 2024-05-15 [1] RSPM

fontawesome 0.5.3 2024-11-16 [1] RSPM

foreign 0.8-91 2026-01-29 [2] CRAN (R 4.6.0)

fs 2.1.0 2026-04-18 [1] RSPM

generics 0.1.4 2025-05-09 [1] RSPM

gert 2.3.1 2026-01-11 [1] RSPM

gh 1.5.0 2025-05-26 [1] RSPM

git2r 0.36.2 2025-03-29 [1] RSPM

gitcreds 0.1.2 2022-09-08 [1] RSPM

glue 1.8.1 2026-04-17 [1] RSPM

graphics * 4.6.0 2026-04-24 [2] local

grDevices * 4.6.0 2026-04-24 [2] local

grid 4.6.0 2026-04-24 [2] local

highr 0.12 2026-03-06 [1] RSPM

hms 1.1.4 2025-10-17 [1] RSPM

htmltools 0.5.9 2025-12-04 [1] RSPM

htmlwidgets 1.6.4 2023-12-06 [1] RSPM

httptest2 1.2.2 2025-11-16 [1] RSPM

httpuv 1.6.17 2026-03-18 [1] RSPM

httr 1.4.8 2026-02-13 [1] RSPM

httr2 1.2.2 2025-12-08 [1] RSPM

ini 0.3.1 2018-05-20 [1] RSPM

janitor 2.2.1 2024-12-22 [1] RSPM

jquerylib 0.1.4 2021-04-26 [1] RSPM

jsonlite 2.0.0 2025-03-27 [1] RSPM

KernSmooth 2.23-26 2025-01-01 [2] CRAN (R 4.6.0)

knitr 1.51 2025-12-20 [1] RSPM

later 1.4.8 2026-03-05 [1] RSPM

lattice 0.22-9 2026-02-09 [2] CRAN (R 4.6.0)

lifecycle 1.0.5 2026-01-08 [1] RSPM

littler 0.3.23 2026-04-12 [1] RSPM (R 4.6.0)

lubridate 1.9.5 2026-02-04 [1] RSPM

magick 2.9.1 2026-02-28 [1] RSPM

magrittr 2.0.5 2026-04-04 [1] RSPM

MASS 7.3-65 2025-02-28 [2] CRAN (R 4.6.0)

Matrix 1.7-5 2026-03-21 [2] CRAN (R 4.6.0)

memoise 2.0.1 2021-11-26 [1] RSPM

methods * 4.6.0 2026-04-24 [2] local

mgcv 1.9-4 2025-11-07 [2] CRAN (R 4.6.0)

mime 0.13 2025-03-17 [1] RSPM

miniUI 0.1.2 2025-04-17 [1] RSPM

nectar 0.0.0.9007 2026-05-18 [1] Github (api2r/nectar@9c6c19d)

nlme 3.1-169 2026-03-27 [2] CRAN (R 4.6.0)

nnet 7.3-20 2025-01-01 [2] CRAN (R 4.6.0)

openssl 2.4.1 2026-05-14 [1] RSPM

otel 0.2.0 2025-08-29 [1] RSPM

pak 0.9.5 2026-04-27 [1] RSPM (R 4.6.0)

parallel 4.6.0 2026-04-24 [2] local

pillar 1.11.1 2025-09-17 [1] RSPM

pkgbuild 1.4.8 2025-05-26 [1] RSPM

pkgconfig 2.0.3 2019-09-22 [1] RSPM

pkgdown 2.2.0 2025-11-06 [1] RSPM

pkgload 1.5.2 2026-04-22 [1] RSPM

praise 1.0.0 2015-08-11 [1] RSPM

prettyunits 1.2.0 2023-09-24 [1] RSPM

processx 3.9.0 2026-04-22 [1] RSPM

profvis 0.4.0 2024-09-20 [1] RSPM

promises 1.5.0 2025-11-01 [1] RSPM

ps 1.9.3 2026-04-20 [1] RSPM

purrr 1.2.2 2026-04-10 [1] RSPM

qcthat 1.1.2 2026-05-18 [1] Github (Gilead-BioStats/qcthat@d0958dc)

R6 2.6.1 2025-02-15 [1] RSPM

ragg 1.5.2 2026-03-23 [1] RSPM

rapid 0.0.0.9003 2026-05-18 [1] Github (api2r/rapid@4fd4d2a)

rappdirs 0.3.4 2026-01-17 [1] RSPM

rcmdcheck 1.4.0 2021-09-27 [1] RSPM

Rcpp 1.1.1-1.1 2026-04-24 [1] RSPM

rex 1.2.2 2026-03-28 [1] RSPM

rlang 1.2.0 2026-04-06 [1] RSPM

rmarkdown 2.31 2026-03-26 [1] RSPM

roxygen2 8.0.0 2026-05-01 [1] RSPM

rpart 4.1.27 2026-03-27 [2] CRAN (R 4.6.0)

rprojroot 2.1.1 2025-08-26 [1] RSPM

rrapply 1.2.8 2025-11-25 [1] RSPM

rstudioapi 0.18.0 2026-01-16 [1] RSPM

rversions 3.0.0 2025-10-09 [1] RSPM

rvest 1.0.5 2025-08-29 [1] RSPM

S7 0.2.2 2026-04-22 [1] RSPM

sass 0.4.10 2025-04-11 [1] RSPM

selectr 0.5-1 2025-12-17 [1] RSPM

sessioninfo 1.2.3 2025-02-05 [1] RSPM

shiny 1.13.0 2026-02-20 [1] RSPM

snakecase 0.11.1 2023-08-27 [1] RSPM

sourcetools 0.1.7-2 2026-03-28 [1] RSPM

spatial 7.3-18 2025-01-01 [2] CRAN (R 4.6.0)

splines 4.6.0 2026-04-24 [2] local

stats * 4.6.0 2026-04-24 [2] local

stats4 4.6.0 2026-04-24 [2] local

stbl 0.3.0.9000 2026-05-18 [1] Github (wranglezone/stbl@5a38548)

stringi 1.8.7 2025-03-27 [1] RSPM

stringr 1.6.0 2025-11-04 [1] RSPM

survival 3.8-6 2026-01-16 [2] CRAN (R 4.6.0)

sys 3.4.3 2024-10-04 [1] RSPM

systemfonts 1.3.2 2026-03-05 [1] RSPM

tcltk 4.6.0 2026-04-24 [2] local

testthat 3.3.2 2026-01-11 [1] RSPM

textshaping 1.0.5 2026-03-06 [1] RSPM

tibble 3.3.1 2026-01-11 [1] RSPM

tibblify 0.4.1.9000 2026-05-18 [1] Github (wranglezone/tibblify@d600ef9)

tidyr 1.3.2 2025-12-19 [1] RSPM

tidyselect 1.2.1 2024-03-11 [1] RSPM

timechange 0.4.0 2026-01-29 [1] RSPM

tinytex 0.59 2026-03-28 [1] RSPM

tools 4.6.0 2026-04-24 [2] local

urlchecker 1.0.1 2021-11-30 [1] RSPM

usethis 3.2.1 2025-09-06 [1] RSPM

utf8 1.2.6 2025-06-08 [1] RSPM

utils * 4.6.0 2026-04-24 [2] local

vctrs 0.7.3 2026-04-11 [1] RSPM

waldo 0.6.2 2025-07-11 [1] RSPM

whisker 0.4.1 2022-12-05 [1] RSPM

withr 3.0.2 2024-10-28 [1] RSPM

xfun 0.57 2026-03-20 [1] RSPM

xml2 1.5.2 2026-01-17 [1] RSPM

xopen 1.0.1 2024-04-25 [1] RSPM

xtable 1.8-8 2026-02-22 [1] RSPM

yaml 2.3.12 2025-12-10 [1] RSPM

zip 2.3.3 2025-05-13 [1] RSPM

[1] /usr/local/lib/R/site-library

[2] /usr/local/lib/R/library

[3] /__w/_temp/Library

  • ── Packages attached to the search path.

──────────────────────────────────────────────────────────────────────────────

@github-actions
Copy link
Copy Markdown

github-actions Bot commented May 18, 2026 •
edited
Loading

{qcthat} Reports

PR-Associated Issues

█ A qcthat issue test matrix with 0 milestones, 0 issues, and 0 tests 
# Issue state: 📥 = open, ☑️ = closed (completed), ⛔ = closed (won't fix)
# Test disposition: ✅ = passed, ❌ = failed, 🚫 = skipped
🙈 1 issue with label "qcthat-nocov" was ignored

Completed Issues

✅ A qcthat issue test matrix with 3 milestones, 13 issues, and 35 tests 
├─█─Milestone: v0.1.0 (4 issues, 3 tests)
│ ├─☑️─Feature 35: Create testthat/setup.R
│ │ └─✅─generate_pkg() returns a vector of created files (#15, #16, #35, #82)
│ ├─☑️─Feature 17: Auto-generate auth for api_key (query or header)
│ │ └─✅─generate_pkg() generates call function with API keys (#17, #82)
│ ├─☑️─Feature 16: Generate tests for basic call function
│ │ ├─✅─.setup_r() sets up dependencies (#16)
│ │ └─✅─generate_pkg() returns a vector of created files (#15, #16, #35, #82)
│ └─☑️─Feature 15: Auto-generate apis.guru caller from rapid
│   └─✅─generate_pkg() returns a vector of created files (#15, #16, #35, #82)
├─█─Milestone: v0.4.0 (2 issues, 2 tests)
│ ├─☑️─Infrastructure 52: Eliminate dplyr dependency
│ │ └─✅─%|% works (#52)
│ └─☑️─Infrastructure 10: Config 
│   └─✅─use_beekeeper writes a yml config (#10)
└─█─Milestone: v0.5.0 Parameter docs and type checks (7 issues, 32 tests)
  ├─☑️─Feature 101: Export `generate_pkg_*()` functions
  │ ├─✅─generate_pkg_auth() writes auth files and saved security data (#101)
  │ ├─✅─generate_pkg_paths() reads saved inputs from config (#101)
  │ ├─✅─generate_pkg_req_prepare() reads saved inputs from config (#101)
  │ ├─✅─generate_pkg_shared_params() reads saved security data (#101)
  │ ├─✅─read_security_schemes() reads security schemes (#101)
  │ ├─✅─read_security_data_filename() defaults when config omits it (#101)
  │ ├─✅─read_security_data_filename() reads configured filenames (#101)
  │ ├─✅─read_security_data() reads saved security data (#101)
  │ ├─✅─read_security_data() returns empty list for empty files (#101)
  │ └─✅─.write_config_field() updates an existing config file (#101)
  ├─☑️─Feature 99: Better read helpers
  │ ├─✅─read_api_abbr() reads api abbrs (#99)
  │ └─✅─read_api_title() reads api titles (#99)
  ├─☑️─Feature 85: Parameter type documentation
  │ └─✅─.compile_param_class_descriptions() uses class names (#85)
  ├─☑️─Feature 84: Header and cookie parameters
  │ └─✅─.generate_paths_file() renders header and cookie params correctly (#84, #69)
  ├─☑️─Feature 82: Separate Config Loader Function
  │ ├─✅─generate_pkg() returns a vector of created files (#15, #16, #35, #82)
  │ ├─✅─generate_pkg() generates call function with API keys (#17, #82)
  │ ├─✅─generate_pkg() falls back to config file when arguments are NULL (#82)
  │ ├─✅─read_config() reads configs (#82)
  │ └─✅─read_api_definition() reads api definitions (#82)
  ├─☑️─Feature 69: Param validation 
  │ ├─✅─.params_to_validations() only includes supported checks (#69)
  │ ├─✅─.paths_need_stbl() flags actionable validations (#69)
  │ ├─✅─.paths_need_stbl() returns FALSE for empty paths (#69)
  │ ├─✅─.generate_paths_file() renders header and cookie params correctly (#84, #69)
  │ └─✅─.maybe_use_stbl() can add stbl to imports (#69)
  └─☑️─Feature 65: Path file per endpoint
    ├─✅─.generate_paths() returns empty character for empty paths (#65)
    ├─✅─.generate_paths() calls correct templates for guru (#65)
    ├─✅─.generate_paths() writes correct templates for guru (#65)
    ├─✅─.generate_paths() calls correct templates for fec (#65)
    ├─✅─.generate_paths() writes correct paths.R for fec (#65)
    ├─✅─.generate_paths() writes correct paths.R for trello (#65)
    ├─✅─.generate_shared_params() returns file path for no-security API (#65)
    ├─✅─.generate_shared_params() writes correct content for no-security API (#65)
    └─✅─.generate_shared_params() writes security params for API with security (#65)
# Issue state: 📥 = open, ☑️ = closed (completed), ⛔ = closed (won't fix)
# Test disposition: ✅ = passed, ❌ = failed, 🚫 = skipped
✅ All tests passed

🟢 All issues have at least one test

🙈 6 issues with label "qcthat-nocov" were ignored

This report was generated by this GitHub Actions run.

Last updated: 2026-05-18 14:41:26 UTC

Session Info ─ Session info ───────────────────────────────────────────────────────────────

setting value

version R version 4.6.0 (2026-04-24)

os Ubuntu 24.04.4 LTS

system x86_64, linux-gnu

ui X11

language (EN)

collate en_US.UTF-8

ctype en_US.UTF-8

tz UTC

date 2026-05-18

pandoc 3.1.3 @ /usr/bin/pandoc

quarto NA

─ Packages ───────────────────────────────────────────────────────────────────

package * version date (UTC) lib source

askpass 1.2.1 2024-10-04 [1] RSPM

astgrepr 0.1.1 2025-06-07 [1] RSPM

backports 1.5.1 2026-04-03 [1] RSPM

base * 4.6.0 2026-04-24 [2] local

base64enc 0.1-6 2026-02-02 [1] RSPM

beekeeper 0.4.0.9000 2026-05-18 [1] local

boot 1.3-32 2025-08-29 [2] CRAN (R 4.6.0)

brew 1.0-10 2023-12-16 [1] RSPM

brio 1.1.5 2024-04-24 [1] RSPM

bslib 0.11.0 2026-05-16 [1] RSPM

cachem 1.1.0 2024-05-16 [1] RSPM

callr 3.7.6 2024-03-25 [1] RSPM

checkmate 2.3.4 2026-02-03 [1] RSPM

class 7.3-23 2025-01-01 [2] CRAN (R 4.6.0)

cli 3.6.6 2026-04-09 [1] RSPM

clipr 0.8.0 2022-02-22 [1] RSPM

cluster 2.1.8.2 2026-02-05 [2] CRAN (R 4.6.0)

codetools 0.2-20 2024-03-31 [2] CRAN (R 4.6.0)

commonmark 2.0.0 2025-07-07 [1] RSPM

compiler 4.6.0 2026-04-24 [2] local

covr 3.6.5 2025-11-09 [1] RSPM

crayon 1.5.3 2024-06-20 [1] RSPM

credentials 2.0.3 2025-09-12 [1] RSPM

curl 7.1.0 2026-04-22 [1] RSPM

datasets * 4.6.0 2026-04-24 [2] local

desc 1.4.3 2023-12-10 [1] RSPM

devtools 2.5.2 2026-04-30 [1] RSPM

diffobj 0.3.6 2025-04-21 [1] RSPM

digest 0.6.39 2025-11-19 [1] RSPM

docopt 0.7.2 2025-03-25 [1] RSPM (R 4.6.0)

downlit 0.4.5 2025-11-14 [1] RSPM

dplyr 1.2.1 2026-04-03 [1] RSPM

ellipsis 0.3.3 2026-04-04 [1] RSPM

emoji 16.0.0 2024-10-28 [1] RSPM

evaluate 1.0.5 2025-08-27 [1] RSPM

fansi 1.0.7 2025-11-19 [1] RSPM

fastmap 1.2.0 2024-05-15 [1] RSPM

fontawesome 0.5.3 2024-11-16 [1] RSPM

foreign 0.8-91 2026-01-29 [2] CRAN (R 4.6.0)

fs 2.1.0 2026-04-18 [1] RSPM

generics 0.1.4 2025-05-09 [1] RSPM

gert 2.3.1 2026-01-11 [1] RSPM

gh 1.5.0 2025-05-26 [1] RSPM

git2r 0.36.2 2025-03-29 [1] RSPM

gitcreds 0.1.2 2022-09-08 [1] RSPM

glue 1.8.1 2026-04-17 [1] RSPM

graphics * 4.6.0 2026-04-24 [2] local

grDevices * 4.6.0 2026-04-24 [2] local

grid 4.6.0 2026-04-24 [2] local

highr 0.12 2026-03-06 [1] RSPM

hms 1.1.4 2025-10-17 [1] RSPM

htmltools 0.5.9 2025-12-04 [1] RSPM

htmlwidgets 1.6.4 2023-12-06 [1] RSPM

httptest2 1.2.2 2025-11-16 [1] RSPM

httpuv 1.6.17 2026-03-18 [1] RSPM

httr 1.4.8 2026-02-13 [1] RSPM

httr2 1.2.2 2025-12-08 [1] RSPM

ini 0.3.1 2018-05-20 [1] RSPM

janitor 2.2.1 2024-12-22 [1] RSPM

jquerylib 0.1.4 2021-04-26 [1] RSPM

jsonlite 2.0.0 2025-03-27 [1] RSPM

KernSmooth 2.23-26 2025-01-01 [2] CRAN (R 4.6.0)

knitr 1.51 2025-12-20 [1] RSPM

later 1.4.8 2026-03-05 [1] RSPM

lattice 0.22-9 2026-02-09 [2] CRAN (R 4.6.0)

lifecycle 1.0.5 2026-01-08 [1] RSPM

littler 0.3.23 2026-04-12 [1] RSPM (R 4.6.0)

lubridate 1.9.5 2026-02-04 [1] RSPM

magick 2.9.1 2026-02-28 [1] RSPM

magrittr 2.0.5 2026-04-04 [1] RSPM

MASS 7.3-65 2025-02-28 [2] CRAN (R 4.6.0)

Matrix 1.7-5 2026-03-21 [2] CRAN (R 4.6.0)

memoise 2.0.1 2021-11-26 [1] RSPM

methods * 4.6.0 2026-04-24 [2] local

mgcv 1.9-4 2025-11-07 [2] CRAN (R 4.6.0)

mime 0.13 2025-03-17 [1] RSPM

miniUI 0.1.2 2025-04-17 [1] RSPM

nectar 0.0.0.9007 2026-05-18 [1] Github (api2r/nectar@9c6c19d)

nlme 3.1-169 2026-03-27 [2] CRAN (R 4.6.0)

nnet 7.3-20 2025-01-01 [2] CRAN (R 4.6.0)

openssl 2.4.1 2026-05-14 [1] RSPM

otel 0.2.0 2025-08-29 [1] RSPM

pak 0.9.5 2026-04-27 [1] RSPM (R 4.6.0)

parallel 4.6.0 2026-04-24 [2] local

pillar 1.11.1 2025-09-17 [1] RSPM

pkgbuild 1.4.8 2025-05-26 [1] RSPM

pkgconfig 2.0.3 2019-09-22 [1] RSPM

pkgdown 2.2.0 2025-11-06 [1] RSPM

pkgload 1.5.2 2026-04-22 [1] RSPM

praise 1.0.0 2015-08-11 [1] RSPM

prettyunits 1.2.0 2023-09-24 [1] RSPM

processx 3.9.0 2026-04-22 [1] RSPM

profvis 0.4.0 2024-09-20 [1] RSPM

promises 1.5.0 2025-11-01 [1] RSPM

ps 1.9.3 2026-04-20 [1] RSPM

purrr 1.2.2 2026-04-10 [1] RSPM

qcthat 1.1.2 2026-05-18 [1] Github (Gilead-BioStats/qcthat@d0958dc)

R6 2.6.1 2025-02-15 [1] RSPM

ragg 1.5.2 2026-03-23 [1] RSPM

rapid 0.0.0.9003 2026-05-18 [1] Github (api2r/rapid@4fd4d2a)

rappdirs 0.3.4 2026-01-17 [1] RSPM

rcmdcheck 1.4.0 2021-09-27 [1] RSPM

Rcpp 1.1.1-1.1 2026-04-24 [1] RSPM

rex 1.2.2 2026-03-28 [1] RSPM

rlang 1.2.0 2026-04-06 [1] RSPM

rmarkdown 2.31 2026-03-26 [1] RSPM

roxygen2 8.0.0 2026-05-01 [1] RSPM

rpart 4.1.27 2026-03-27 [2] CRAN (R 4.6.0)

rprojroot 2.1.1 2025-08-26 [1] RSPM

rrapply 1.2.8 2025-11-25 [1] RSPM

rstudioapi 0.18.0 2026-01-16 [1] RSPM

rversions 3.0.0 2025-10-09 [1] RSPM

rvest 1.0.5 2025-08-29 [1] RSPM

S7 0.2.2 2026-04-22 [1] RSPM

sass 0.4.10 2025-04-11 [1] RSPM

selectr 0.5-1 2025-12-17 [1] RSPM

sessioninfo 1.2.3 2025-02-05 [1] RSPM

shiny 1.13.0 2026-02-20 [1] RSPM

snakecase 0.11.1 2023-08-27 [1] RSPM

sourcetools 0.1.7-2 2026-03-28 [1] RSPM

spatial 7.3-18 2025-01-01 [2] CRAN (R 4.6.0)

splines 4.6.0 2026-04-24 [2] local

stats * 4.6.0 2026-04-24 [2] local

stats4 4.6.0 2026-04-24 [2] local

stbl 0.3.0.9000 2026-05-18 [1] Github (wranglezone/stbl@5a38548)

stringi 1.8.7 2025-03-27 [1] RSPM

stringr 1.6.0 2025-11-04 [1] RSPM

survival 3.8-6 2026-01-16 [2] CRAN (R 4.6.0)

sys 3.4.3 2024-10-04 [1] RSPM

systemfonts 1.3.2 2026-03-05 [1] RSPM

tcltk 4.6.0 2026-04-24 [2] local

testthat 3.3.2 2026-01-11 [1] RSPM

textshaping 1.0.5 2026-03-06 [1] RSPM

tibble 3.3.1 2026-01-11 [1] RSPM

tibblify 0.4.1.9000 2026-05-18 [1] Github (wranglezone/tibblify@d600ef9)

tidyr 1.3.2 2025-12-19 [1] RSPM

tidyselect 1.2.1 2024-03-11 [1] RSPM

timechange 0.4.0 2026-01-29 [1] RSPM

tinytex 0.59 2026-03-28 [1] RSPM

tools 4.6.0 2026-04-24 [2] local

urlchecker 1.0.1 2021-11-30 [1] RSPM

usethis 3.2.1 2025-09-06 [1] RSPM

utf8 1.2.6 2025-06-08 [1] RSPM

utils * 4.6.0 2026-04-24 [2] local

vctrs 0.7.3 2026-04-11 [1] RSPM

waldo 0.6.2 2025-07-11 [1] RSPM

whisker 0.4.1 2022-12-05 [1] RSPM

withr 3.0.2 2024-10-28 [1] RSPM

xfun 0.57 2026-03-20 [1] RSPM

xml2 1.5.2 2026-01-17 [1] RSPM

xopen 1.0.1 2024-04-25 [1] RSPM

xtable 1.8-8 2026-02-22 [1] RSPM

yaml 2.3.12 2025-12-10 [1] RSPM

zip 2.3.3 2025-05-13 [1] RSPM

[1] /usr/local/lib/R/site-library

[2] /usr/local/lib/R/library

[3] /__w/_temp/Library

  • ── Packages attached to the search path.

──────────────────────────────────────────────────────────────────────────────

@github-actions
Copy link
Copy Markdown

github-actions Bot commented May 18, 2026 •
edited
Loading

🌐 PR pkgdown deployed

This report was generated by this GitHub Actions run.

Last updated: 2026-05-18 14:41:43 UTC

Session Info ─ Session info ───────────────────────────────────────────────────────────────

setting value

version R version 4.6.0 (2026-04-24)

os Ubuntu 24.04.4 LTS

system x86_64, linux-gnu

ui X11

language (EN)

collate en_US.UTF-8

ctype en_US.UTF-8

tz UTC

date 2026-05-18

pandoc 3.1.3 @ /usr/bin/pandoc

quarto NA

─ Packages ───────────────────────────────────────────────────────────────────

package * version date (UTC) lib source

askpass 1.2.1 2024-10-04 [1] RSPM

astgrepr 0.1.1 2025-06-07 [1] RSPM

backports 1.5.1 2026-04-03 [1] RSPM

base * 4.6.0 2026-04-24 [2] local

base64enc 0.1-6 2026-02-02 [1] RSPM

beekeeper 0.4.0.9000 2026-05-18 [1] local

boot 1.3-32 2025-08-29 [2] CRAN (R 4.6.0)

brew 1.0-10 2023-12-16 [1] RSPM

brio 1.1.5 2024-04-24 [1] RSPM

bslib 0.11.0 2026-05-16 [1] RSPM

cachem 1.1.0 2024-05-16 [1] RSPM

callr 3.7.6 2024-03-25 [1] RSPM

checkmate 2.3.4 2026-02-03 [1] RSPM

class 7.3-23 2025-01-01 [2] CRAN (R 4.6.0)

cli 3.6.6 2026-04-09 [1] RSPM

clipr 0.8.0 2022-02-22 [1] RSPM

cluster 2.1.8.2 2026-02-05 [2] CRAN (R 4.6.0)

codetools 0.2-20 2024-03-31 [2] CRAN (R 4.6.0)

commonmark 2.0.0 2025-07-07 [1] RSPM

compiler 4.6.0 2026-04-24 [2] local

covr 3.6.5 2025-11-09 [1] RSPM

crayon 1.5.3 2024-06-20 [1] RSPM

credentials 2.0.3 2025-09-12 [1] RSPM

curl 7.1.0 2026-04-22 [1] RSPM

datasets * 4.6.0 2026-04-24 [2] local

desc 1.4.3 2023-12-10 [1] RSPM

devtools 2.5.2 2026-04-30 [1] RSPM

diffobj 0.3.6 2025-04-21 [1] RSPM

digest 0.6.39 2025-11-19 [1] RSPM

docopt 0.7.2 2025-03-25 [1] RSPM (R 4.6.0)

downlit 0.4.5 2025-11-14 [1] RSPM

dplyr 1.2.1 2026-04-03 [1] RSPM

ellipsis 0.3.3 2026-04-04 [1] RSPM

emoji 16.0.0 2024-10-28 [1] RSPM

evaluate 1.0.5 2025-08-27 [1] RSPM

fansi 1.0.7 2025-11-19 [1] RSPM

fastmap 1.2.0 2024-05-15 [1] RSPM

fontawesome 0.5.3 2024-11-16 [1] RSPM

foreign 0.8-91 2026-01-29 [2] CRAN (R 4.6.0)

fs 2.1.0 2026-04-18 [1] RSPM

generics 0.1.4 2025-05-09 [1] RSPM

gert 2.3.1 2026-01-11 [1] RSPM

gh 1.5.0 2025-05-26 [1] RSPM

git2r 0.36.2 2025-03-29 [1] RSPM

gitcreds 0.1.2 2022-09-08 [1] RSPM

glue 1.8.1 2026-04-17 [1] RSPM

graphics * 4.6.0 2026-04-24 [2] local

grDevices * 4.6.0 2026-04-24 [2] local

grid 4.6.0 2026-04-24 [2] local

here 1.0.2 2025-09-15 [1] RSPM

highr 0.12 2026-03-06 [1] RSPM

hms 1.1.4 2025-10-17 [1] RSPM

htmltools 0.5.9 2025-12-04 [1] RSPM

htmlwidgets 1.6.4 2023-12-06 [1] RSPM

httptest2 1.2.2 2025-11-16 [1] RSPM

httpuv 1.6.17 2026-03-18 [1] RSPM

httr 1.4.8 2026-02-13 [1] RSPM

httr2 1.2.2 2025-12-08 [1] RSPM

ini 0.3.1 2018-05-20 [1] RSPM

janitor 2.2.1 2024-12-22 [1] RSPM

jquerylib 0.1.4 2021-04-26 [1] RSPM

jsonlite 2.0.0 2025-03-27 [1] RSPM

KernSmooth 2.23-26 2025-01-01 [2] CRAN (R 4.6.0)

knitr 1.51 2025-12-20 [1] RSPM

later 1.4.8 2026-03-05 [1] RSPM

lattice 0.22-9 2026-02-09 [2] CRAN (R 4.6.0)

lifecycle 1.0.5 2026-01-08 [1] RSPM

littler 0.3.23 2026-04-12 [1] RSPM (R 4.6.0)

lubridate 1.9.5 2026-02-04 [1] RSPM

magick 2.9.1 2026-02-28 [1] RSPM

magrittr 2.0.5 2026-04-04 [1] RSPM

MASS 7.3-65 2025-02-28 [2] CRAN (R 4.6.0)

Matrix 1.7-5 2026-03-21 [2] CRAN (R 4.6.0)

memoise 2.0.1 2021-11-26 [1] RSPM

methods * 4.6.0 2026-04-24 [2] local

mgcv 1.9-4 2025-11-07 [2] CRAN (R 4.6.0)

mime 0.13 2025-03-17 [1] RSPM

miniUI 0.1.2 2025-04-17 [1] RSPM

nectar 0.0.0.9007 2026-05-18 [1] Github (api2r/nectar@9c6c19d)

nlme 3.1-169 2026-03-27 [2] CRAN (R 4.6.0)

nnet 7.3-20 2025-01-01 [2] CRAN (R 4.6.0)

openssl 2.4.1 2026-05-14 [1] RSPM

otel 0.2.0 2025-08-29 [1] RSPM

pak 0.9.5 2026-04-27 [1] RSPM (R 4.6.0)

parallel 4.6.0 2026-04-24 [2] local

pillar 1.11.1 2025-09-17 [1] RSPM

pkgbuild 1.4.8 2025-05-26 [1] RSPM

pkgconfig 2.0.3 2019-09-22 [1] RSPM

pkgdown 2.2.0 2025-11-06 [1] RSPM

pkgload 1.5.2 2026-04-22 [1] RSPM

praise 1.0.0 2015-08-11 [1] RSPM

prettyunits 1.2.0 2023-09-24 [1] RSPM

processx 3.9.0 2026-04-22 [1] RSPM

profvis 0.4.0 2024-09-20 [1] RSPM

promises 1.5.0 2025-11-01 [1] RSPM

ps 1.9.3 2026-04-20 [1] RSPM

purrr 1.2.2 2026-04-10 [1] RSPM

qcthat 1.1.2.9000 2026-05-18 [1] Github (Gilead-BioStats/qcthat@038f5e7)

quarto 1.5.1 2025-09-04 [1] RSPM

R6 2.6.1 2025-02-15 [1] RSPM

ragg 1.5.2 2026-03-23 [1] RSPM

rapid 0.0.0.9003 2026-05-18 [1] Github (api2r/rapid@4fd4d2a)

rappdirs 0.3.4 2026-01-17 [1] RSPM

rcmdcheck 1.4.0 2021-09-27 [1] RSPM

Rcpp 1.1.1-1.1 2026-04-24 [1] RSPM

rex 1.2.2 2026-03-28 [1] RSPM

rlang 1.2.0 2026-04-06 [1] RSPM

rmarkdown 2.31 2026-03-26 [1] RSPM

roxygen2 8.0.0 2026-05-01 [1] RSPM

rpart 4.1.27 2026-03-27 [2] CRAN (R 4.6.0)

rprojroot 2.1.1 2025-08-26 [1] RSPM

rrapply 1.2.8 2025-11-25 [1] RSPM

rstudioapi 0.18.0 2026-01-16 [1] RSPM

rversions 3.0.0 2025-10-09 [1] RSPM

rvest 1.0.5 2025-08-29 [1] RSPM

S7 0.2.2 2026-04-22 [1] RSPM

sass 0.4.10 2025-04-11 [1] RSPM

selectr 0.5-1 2025-12-17 [1] RSPM

sessioninfo 1.2.3 2025-02-05 [1] RSPM

shiny 1.13.0 2026-02-20 [1] RSPM

snakecase 0.11.1 2023-08-27 [1] RSPM

sourcetools 0.1.7-2 2026-03-28 [1] RSPM

spatial 7.3-18 2025-01-01 [2] CRAN (R 4.6.0)

splines 4.6.0 2026-04-24 [2] local

stats * 4.6.0 2026-04-24 [2] local

stats4 4.6.0 2026-04-24 [2] local

stbl 0.3.0.9000 2026-05-18 [1] Github (wranglezone/stbl@5a38548)

stringi 1.8.7 2025-03-27 [1] RSPM

stringr 1.6.0 2025-11-04 [1] RSPM

survival 3.8-6 2026-01-16 [2] CRAN (R 4.6.0)

sys 3.4.3 2024-10-04 [1] RSPM

systemfonts 1.3.2 2026-03-05 [1] RSPM

tcltk 4.6.0 2026-04-24 [2] local

testthat 3.3.2 2026-01-11 [1] RSPM

textshaping 1.0.5 2026-03-06 [1] RSPM

tibble 3.3.1 2026-01-11 [1] RSPM

tibblify 0.4.1.9000 2026-05-18 [1] Github (wranglezone/tibblify@d600ef9)

tidyr 1.3.2 2025-12-19 [1] RSPM

tidyselect 1.2.1 2024-03-11 [1] RSPM

timechange 0.4.0 2026-01-29 [1] RSPM

tinytex 0.59 2026-03-28 [1] RSPM

tools 4.6.0 2026-04-24 [2] local

urlchecker 1.0.1 2021-11-30 [1] RSPM

usethis 3.2.1 2025-09-06 [1] RSPM

utf8 1.2.6 2025-06-08 [1] RSPM

utils * 4.6.0 2026-04-24 [2] local

vctrs 0.7.3 2026-04-11 [1] RSPM

waldo 0.6.2 2025-07-11 [1] RSPM

whisker 0.4.1 2022-12-05 [1] RSPM

withr 3.0.2 2024-10-28 [1] RSPM

xfun 0.57 2026-03-20 [1] RSPM

xml2 1.5.2 2026-01-17 [1] RSPM

xopen 1.0.1 2024-04-25 [1] RSPM

xtable 1.8-8 2026-02-22 [1] RSPM

yaml 2.3.12 2025-12-10 [1] RSPM

zip 2.3.3 2025-05-13 [1] RSPM

[1] /usr/local/lib/R/site-library

[2] /usr/local/lib/R/library

[3] /__w/_temp/Library

  • ── Packages attached to the search path.

──────────────────────────────────────────────────────────────────────────────

@jonthegeek
Link to httr2.
ce8d1f8 
Split between sentences for future track changes.
@api2r api2r deleted a comment from github-actions Bot May 18, 2026
@jonthegeek jonthegeek requested a review from Copilot May 18, 2026 14:21
Copilot AI reviewed May 18, 2026
View reviewed changes
Copy link
Copy Markdown

Copilot AI left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Pull request overview

This PR moves grant milestone details out of the README into a new pkgdown article, updates README messaging for the pre-CRAN/development state, and removes the current NEWS.md workflow references.

Changes:

  • Adds a grant milestone article under vignettes/articles/.
  • Simplifies README content and adjusts pkgdown release/development sections.
  • Removes NEWS.md and updates related contributor/package-site configuration.

Reviewed changes

Copilot reviewed 10 out of 10 changed files in this pull request and generated 6 comments.

Show a summary per file
File Description
vignettes/articles/milestones.Rmd Adds detailed R Consortium grant milestone tracking.
vignettes/articles/.gitignore Ignores rendered article artifacts.
README.Rmd Updates README source with milestone link and release/development messaging.
README.md Regenerated README output.
NEWS.md Removes the current development changelog.
DESCRIPTION Adds website dependency configuration.
AGENTS.md Removes NEWS.md from the repository structure list.
.Rbuildignore Excludes pkgdown-only article sources from package builds.
.github/workflows/pkgdown.yaml Updates PR preview comment URL to include /dev.
.github/CONTRIBUTING.md Removes contributor instruction to update NEWS.md.

Comment thread README.Rmd
Comment thread README.Rmd
Comment thread vignettes/articles/milestones.Rmd Outdated
Comment thread vignettes/articles/milestones.Rmd Outdated
Comment thread vignettes/articles/milestones.Rmd Outdated
Comment thread AGENTS.md
@jonthegeek jonthegeek enabled auto-merge (squash) May 18, 2026 14:39
@jonthegeek jonthegeek merged commit 2ee32f1 into main May 18, 2026
10 checks passed
@jonthegeek jonthegeek deleted the readme-0.5 branch May 18, 2026 14:43
github-actions Bot pushed a commit that referenced this pull request May 18, 2026
@jonthegeek
Remove preview for PR #104
4cccf45
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

Copilot code review Copilot Copilot left review comments

Assignees

No one assigned

Labels

None yet

Projects

None yet

Milestone

No milestone

Development

Successfully merging this pull request may close these issues.

Update website and README

2 participants

@jonthegeek