Conversion scripts

[yardasol]

Summary of changes

This PR adds scripts that convert Serpent material and geometry files to OpenMC material and Geometry files.

Specifically, this PR adds:

• Two scripts (including instructions on how to use them in README files):
  1. scripts/preprocessors/generate_mat_composition/convert_material_serpent_to_openmc.py, that converts a serpent-formatted material file to an openmc-formatted material file.
  2. scripts/preprocessprs/generate_geometry/converte_geometry_serpent_to_openmc.py, that converts a serpent-formatted geometry file to an openmc-formatted geometry file.

Types of changes

• Bug fix (non-breaking change which fixes an issue)
• New feature (non-breaking change which adds functionality)
• Breaking change (fix or feature that would cause existing functionality to change)

Required for Merging

• I have read the CONTRIBUTING document.
• My code follows the code style of this project.
• My change requires a change to the documentation.
  • I have updated the documentation accordingly.
• My change is a source code change
  • I have added/modified tests to cover my changes
  • I have explained why my change does not require new/modified tests
• My change is a user-facing change
  • I have recorded my changes in the changelog for the upcoming release
• My change is exclusively related to the repository (e.g. GitHub actions workflows, PR/issue templates, etc.)
  • I have verified or justified that my change will work as intended.
• All new and existing tests passed.
  • CI tests pass
  • Local tests pass (including Serpent2 integration tests)

Associated Issues and PRs

• Issue: #

Associated Developers

• Dev: @

Checklist for Reviewers

Reviewers should use this link to get to the
Review Checklist before they begin their review.

[pep8speaks]

Hello @yardasol! Thanks for updating this PR. We checked the lines you've touched for PEP 8 issues, and found:

• In the file saltproc/depcode.py:

Line 12:1: E302 expected 2 blank lines, found 1

• In the file scripts/preprocessors/generate_geometry/_helper_classes.py:

Line 5:1: E302 expected 2 blank lines, found 1
Line 16:1: E302 expected 2 blank lines, found 1
Line 59:80: E501 line too long (85 > 79 characters)
Line 85:80: E501 line too long (82 > 79 characters)
Line 106:5: E303 too many blank lines (2)
Line 111:5: E303 too many blank lines (2)
Line 116:5: E303 too many blank lines (2)
Line 121:5: E303 too many blank lines (2)
Line 126:80: E501 line too long (83 > 79 characters)
Line 129:5: E303 too many blank lines (2)
Line 139:80: E501 line too long (83 > 79 characters)
Line 142:5: E303 too many blank lines (2)
Line 149:5: E303 too many blank lines (2)
Line 151:64: E231 missing whitespace after ','
Line 151:68: E231 missing whitespace after ','
Line 155:5: E303 too many blank lines (2)
Line 162:5: E303 too many blank lines (2)
Line 164:80: E501 line too long (109 > 79 characters)
Line 168:5: E303 too many blank lines (2)
Line 196:16: E111 indentation is not a multiple of four
Line 196:16: E117 over-indented
Line 201:5: E303 too many blank lines (2)
Line 217:10: E231 missing whitespace after ','
Line 217:12: E231 missing whitespace after ','
Line 232:18: E231 missing whitespace after ','
Line 232:20: E231 missing whitespace after ','
Line 235:5: E303 too many blank lines (2)
Line 247:80: E501 line too long (89 > 79 characters)
Line 253:5: E303 too many blank lines (2)
Line 326:17: E741 ambiguous variable name 'l'
Line 347:5: E303 too many blank lines (2)
Line 369:27: E128 continuation line under-indented for visual indent
Line 423:13: E741 ambiguous variable name 'l'
Line 490:15: E225 missing whitespace around operator
Line 511:27: E231 missing whitespace after ','
Line 511:29: E231 missing whitespace after ','
Line 518:27: E231 missing whitespace after ','
Line 518:29: E231 missing whitespace after ','
Line 525:27: E231 missing whitespace after ','
Line 525:29: E231 missing whitespace after ','
Line 532:9: E303 too many blank lines (2)
Line 562:5: E303 too many blank lines (2)
Line 574:5: E303 too many blank lines (2)
Line 587:1: E303 too many blank lines (3)
Line 617:30: E231 missing whitespace after ','
Line 624:11: E231 missing whitespace after ','
Line 626:25: E231 missing whitespace after ','
Line 626:27: E231 missing whitespace after ','
Line 643:5: E303 too many blank lines (2)
Line 644:58: E222 multiple spaces after operator
Line 647:5: E303 too many blank lines (2)
Line 681:11: E231 missing whitespace after ','
Line 681:14: E231 missing whitespace after ','
Line 685:53: E231 missing whitespace after ','
Line 685:59: E231 missing whitespace after ','
Line 685:67: E231 missing whitespace after ','
Line 685:73: E231 missing whitespace after ','
Line 685:80: E501 line too long (92 > 79 characters)
Line 689:5: E303 too many blank lines (2)
Line 693:5: E303 too many blank lines (2)

• In the file scripts/preprocessors/generate_geometry/_helper_regex.py:

Line 1:23: W605 invalid escape sequence '.'
Line 2:30: W605 invalid escape sequence '\s'
Line 2:38: W605 invalid escape sequence '\s'
Line 3:29: W605 invalid escape sequence '\s'
Line 4:21: W605 invalid escape sequence '\s'
Line 4:27: W605 invalid escape sequence '\s'
Line 5:24: W605 invalid escape sequence '\s'
Line 5:39: W605 invalid escape sequence '\s'
Line 5:52: W605 invalid escape sequence '\s'
Line 6:18: W605 invalid escape sequence '\s'
Line 7:26: W605 invalid escape sequence '\s'
Line 8:26: W605 invalid escape sequence '\s'
Line 8:45: W605 invalid escape sequence '\s'
Line 8:52: W605 invalid escape sequence '\s'
Line 9:26: W605 invalid escape sequence '\s'
Line 9:45: W605 invalid escape sequence '\s'
Line 10:24: W605 invalid escape sequence '\s'
Line 10:27: W605 invalid escape sequence '-'
Line 10:30: W605 invalid escape sequence ':'
Line 10:33: W605 invalid escape sequence '#'
Line 11:23: W605 invalid escape sequence '\s'
Line 11:30: W605 invalid escape sequence '\s'
Line 12:23: W605 invalid escape sequence '\s'
Line 12:30: W605 invalid escape sequence '\s'
Line 12:45: W605 invalid escape sequence '\s'
Line 12:55: W605 invalid escape sequence '\s'
Line 12:59: W605 invalid escape sequence '\s'
Line 14:26: W605 invalid escape sequence '\s'
Line 14:37: W605 invalid escape sequence '\s'
Line 14:53: W605 invalid escape sequence '\s'
Line 15:23: W605 invalid escape sequence '\s'
Line 18:22: W605 invalid escape sequence '\s'
Line 18:37: W605 invalid escape sequence '\s'
Line 18:51: W605 invalid escape sequence '\s'
Line 19:13: W605 invalid escape sequence '\s'
Line 19:30: W605 invalid escape sequence '\s'
Line 19:56: W605 invalid escape sequence '\s'
Line 22:29: W605 invalid escape sequence '\s'
Line 22:51: W605 invalid escape sequence '\s'
Line 22:76: W605 invalid escape sequence '\s'
Line 22:80: E501 line too long (81 > 79 characters)
Line 62:1: W391 blank line at end of file

• In the file scripts/preprocessors/generate_geometry/_script_helpers.py:

Line 68:1: E302 expected 2 blank lines, found 1
Line 233:28: E225 missing whitespace around operator
Line 252:28: E225 missing whitespace around operator
Line 256:45: E116 unexpected indentation (comment)
Line 257:45: E116 unexpected indentation (comment)
Line 358:21: E261 at least two spaces before inline comment
Line 358:22: E262 inline comment should start with '# '
Line 359:9: E731 do not assign a lambda expression, use a def
Line 359:32: E203 whitespace before ':'
Line 360:9: E731 do not assign a lambda expression, use a def
Line 360:32: E203 whitespace before ':'
Line 360:42: E231 missing whitespace after ','
Line 362:9: E731 do not assign a lambda expression, use a def
Line 362:32: E203 whitespace before ':'
Line 363:9: E731 do not assign a lambda expression, use a def
Line 363:32: E203 whitespace before ':'
Line 366:13: E731 do not assign a lambda expression, use a def
Line 366:36: E203 whitespace before ':'
Line 367:13: E731 do not assign a lambda expression, use a def
Line 367:36: E203 whitespace before ':'
Line 369:13: E731 do not assign a lambda expression, use a def
Line 369:36: E203 whitespace before ':'
Line 370:13: E731 do not assign a lambda expression, use a def
Line 370:36: E203 whitespace before ':'
Line 371:23: E261 at least two spaces before inline comment
Line 371:24: E262 inline comment should start with '# '
Line 372:9: E731 do not assign a lambda expression, use a def
Line 372:32: E203 whitespace before ':'
Line 372:42: E231 missing whitespace after ','
Line 372:44: E231 missing whitespace after ','
Line 372:46: E231 missing whitespace after ','
Line 373:9: E731 do not assign a lambda expression, use a def
Line 373:32: E203 whitespace before ':'
Line 373:42: E231 missing whitespace after ','
Line 373:44: E231 missing whitespace after ','
Line 373:46: E231 missing whitespace after ','
Line 449:80: E501 line too long (83 > 79 characters)
Line 517:14: W605 invalid escape sequence '\s'
Line 517:31: W605 invalid escape sequence '\s'
Line 517:33: W605 invalid escape sequence '+'
Line 659:5: E265 block comment should start with '# '
Line 661:5: E265 block comment should start with '# '
Line 663:5: E265 block comment should start with '# '
Line 674:5: E265 block comment should start with '# '
Line 676:5: E265 block comment should start with '# '
Line 678:5: E265 block comment should start with '# '
Line 690:5: E303 too many blank lines (2)
Line 705:8: E111 indentation is not a multiple of four
Line 705:62: E231 missing whitespace after ','
Line 706:8: E111 indentation is not a multiple of four
Line 706:46: E231 missing whitespace after ','
Line 707:8: E111 indentation is not a multiple of four
Line 708:8: E111 indentation is not a multiple of four
Line 709:8: E111 indentation is not a multiple of four
Line 711:8: E111 indentation is not a multiple of four
Line 713:5: E266 too many leading '#' for block comment
Line 716:5: E265 block comment should start with '# '
Line 722:5: E265 block comment should start with '# '

• In the file scripts/preprocessors/generate_geometry/convert_geometry_serpent_to_openmc.py:

Line 163:9: E265 block comment should start with '# '
Line 189:9: E265 block comment should start with '# '
Line 190:9: E265 block comment should start with '# '
Line 191:9: E265 block comment should start with '# '
Line 192:9: E265 block comment should start with '# '
Line 225:1: E265 block comment should start with '# '

• In the file scripts/preprocessors/generate_mat_composition/convert_material_serpent_to_openmc.py:

Line 63:9: E303 too many blank lines (2)
Line 77:77: E261 at least two spaces before inline comment
Line 77:80: E501 line too long (115 > 79 characters)
Line 86:9: E265 block comment should start with '# '
Line 101:80: E501 line too long (85 > 79 characters)
Line 116:80: E501 line too long (96 > 79 characters)

Comment last updated at 2022-09-13 19:53:33 UTC

[yardasol]

Closing because I don't think this is relevant to the scope of the work anymore.