Version 1.0.8

New features

• Update to .NET 8
• Show progress when creating plots (this step is normally very fast, but it can take a while for larger trees).
• New, more efficient convergence statistics: $\hat{R}$ and bulk & tail ESS (Vehtari et al., 2021).

Bugfixes

• When computing marginal likelihoods, samples with NaN likelihood are skipped.
• The current MLE is now logged in a file called <prefix>.last.maximum.likelihood.txt.
• Fixed crash with renamed states in Stat-sMap.
• Use double.IsFinite instead of double.IsNaN.
• Fixed issue with rounding errors in duplicate eigenvalues when determining whether a matrix is diagonalisable.
• Fixed parsing of watchdog parameter.
• Avoid issue with deadlock false positives when likelihood computation is slow.
• Fixed bug when determining the order of magnitude of negative values.
• The program now exits with an error when the summary tree contains a split that does not occur in any of the simulation trees.

Update instructions

If you are on Windows or macOS, please uninstall any previous version of sMap before updating the the latest version.

• On Windows, you can uninstall the program by opening the start menu, typing Apps and features, and searching for sMap among the installed applications.
• On macOS, just drag the sMap application from your Applications folder to the rubbish bin.

You can then follow the normal instructions to install the new version of sMap.