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v0.9.1

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@armavicas-release-app armavicas-release-app released this 24 Jan 00:13
· 37 commits to main since this release

Added

  • Allow parameters to be used in rate expressions.

Changed

  • change error message for species not involved in reactions
  • allow species not in reactions to be init but with warning
  • rename lib::Rate into lib::PRate
  • rename PExpr::Concentration into PExpr::Variable

Documentation

  • fix parameters in docs index page
  • add example with Michaelis-Menten rate
  • improve docstrings to explain reaction rates
  • fix some docstrings of the rust API

Fixed

  • use Mapping and Sequence instead of dict and list in type hints
  • raise error on erroneous rate expressions
  • make the rates more strict
  • ensure that the dataset returned has a time coordinate

Miscellaneous

  • update pixi.lock with new version
  • add test with crossed rates
  • remove useless clone
  • remove unused imports