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Merged
ryukzak merged 2 commits into from
Apr 16, 2026
Merged

CI: Rework package-managers job and update deps. Fix work in cjs mode #135

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d7cd872
fix: Rework package-managers CI job and update GitHub Actions
ryukzak Apr 16, 2026
d3b6a94
chore: Update fhirschema to 0.0.11 and fhir-canonical-manager to 0.0.22
ryukzak Apr 16, 2026
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102 changes: 76 additions & 26 deletions .github/workflows/ci.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ jobs:
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@v4
uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
Expand All @@ -35,7 +35,7 @@ jobs:
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@v4
uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
Expand All @@ -48,16 +48,43 @@ jobs:
- name: Run security audit
run: bun audit

build:
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
with:
bun-version: latest

- name: Build and pack
run: |
bun install --frozen-lockfile
bun run build
bun pm pack

- name: Upload tarball
uses: actions/upload-artifact@v5
with:
name: package-tarball
path: "*.tgz"

package-managers:
runs-on: ubuntu-latest
needs: build

strategy:
fail-fast: false
matrix:
package-manager: [bun, npm, pnpm]

steps:
- name: Checkout code
uses: actions/checkout@v4
- name: Download tarball
uses: actions/download-artifact@v5
with:
name: package-tarball

- name: Setup Bun
if: matrix.package-manager == 'bun'
Expand All @@ -67,44 +94,67 @@ jobs:

- name: Setup Node.js
if: matrix.package-manager != 'bun'
uses: actions/setup-node@v4
uses: actions/setup-node@v5
with:
node-version: "20"

- name: Setup pnpm
if: matrix.package-manager == 'pnpm'
uses: pnpm/action-setup@v4
uses: pnpm/action-setup@v5
with:
version: latest

- name: Install dependencies (bun)
if: matrix.package-manager == 'bun'
run: bun install

- name: Install dependencies (npm)
if: matrix.package-manager == 'npm'
run: npm install
- name: Install package
run: |
TARBALL=$(ls *.tgz)
mkdir /tmp/test-install && cd /tmp/test-install
echo '{}' > package.json

- name: Install dependencies (pnpm)
if: matrix.package-manager == 'pnpm'
run: pnpm install
if [ "${{ matrix.package-manager }}" == "bun" ]; then
bun add "$OLDPWD/$TARBALL"
elif [ "${{ matrix.package-manager }}" == "npm" ]; then
npm install "$OLDPWD/$TARBALL"
else
pnpm add "$OLDPWD/$TARBALL"
fi

- name: Run codegen for FHIR R4
- name: Generate FHIR R4 type tree
working-directory: /tmp/test-install
run: |
cat > generate.ts <<'SCRIPT'
import { APIBuilder } from "@atomic-ehr/codegen";

const generate = async () => {
const builder = new APIBuilder()
.fromPackage("hl7.fhir.r4.core", "4.0.1")
.introspection({ typeTree: "./type-tree.json" })
.outputTo("./output");

const report = await builder.generate();

if (!report.success) {
console.error("Generation failed");
process.exit(1);
}

console.log("OK: type tree generated");
};

generate();
SCRIPT

if [ "${{ matrix.package-manager }}" == "bun" ]; then
bun run examples/python/generate.ts
bun generate.ts
elif [ "${{ matrix.package-manager }}" == "npm" ]; then
npx tsx examples/python/generate.ts
npx tsx generate.ts
else
pnpm dlx tsx examples/python/generate.ts
pnpm dlx tsx generate.ts
fi

- name: Verify output exists
- name: Verify output
run: |
if [ -d examples/python/fhir_types ]; then
echo "Output directory generated successfully"
ls -la examples/python/fhir_types
else
echo "Output directory not found"
if [ ! -f /tmp/test-install/output/type-tree.json ]; then
echo "type-tree.json not found"
exit 1
fi
echo "type-tree.json exists ($(wc -c < /tmp/test-install/output/type-tree.json) bytes)"
14 changes: 7 additions & 7 deletions .github/workflows/release.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -21,10 +21,10 @@ jobs:
contents: read
steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v1
uses: oven-sh/setup-bun@v2
with:
bun-version: latest

Expand Down Expand Up @@ -58,7 +58,7 @@ jobs:
require('fs').writeFileSync('package.json', JSON.stringify(pkg, null, 2));
"

- uses: actions/setup-node@v4
- uses: actions/setup-node@v5
with:
node-version: "20"
registry-url: "https://registry.npmjs.org"
Expand All @@ -77,10 +77,10 @@ jobs:
contents: read
steps:
- name: Checkout
uses: actions/checkout@v4
uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v1
uses: oven-sh/setup-bun@v2
with:
bun-version: latest

Expand All @@ -96,7 +96,7 @@ jobs:
- name: Build
run: bun run build

- uses: actions/setup-node@v4
- uses: actions/setup-node@v5
with:
node-version: "20"
registry-url: "https://registry.npmjs.org"
Expand All @@ -108,7 +108,7 @@ jobs:
run: npm publish --tag latest --access public

- name: Create Github Release
uses: softprops/action-gh-release@v2
uses: softprops/action-gh-release@v3
with:
tag_name: ${{ github.ref }}
name: ${{ github.ref_name }}
Expand Down
22 changes: 11 additions & 11 deletions .github/workflows/sdk-tests.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -16,15 +16,15 @@ jobs:
dotnet-version: [8.0.x]

steps:
- uses: actions/checkout@v4
- uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
with:
bun-version: ${{ matrix.bun-version }}

- name: Setup .NET ${{ matrix.dotnet-version }}
uses: actions/setup-dotnet@v4
uses: actions/setup-dotnet@v5
with:
dotnet-version: ${{ matrix.dotnet-version }}

Expand Down Expand Up @@ -57,10 +57,10 @@ jobs:
bun-version: [latest]

steps:
- uses: actions/checkout@v4
- uses: actions/checkout@v5

- name: Checkout code
uses: actions/checkout@v4
uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
Expand Down Expand Up @@ -94,7 +94,7 @@ jobs:
bun-version: [latest]

steps:
- uses: actions/checkout@v4
- uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
Expand Down Expand Up @@ -129,10 +129,10 @@ jobs:
bun-version: [latest]

steps:
- uses: actions/checkout@v4
- uses: actions/checkout@v5

- name: Checkout code
uses: actions/checkout@v4
uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
Expand All @@ -154,7 +154,7 @@ jobs:
python-version: [ "3.13" ]

steps:
- uses: actions/checkout@v4
- uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
Expand Down Expand Up @@ -195,7 +195,7 @@ jobs:
python-version: [ "3.13" ]

steps:
- uses: actions/checkout@v4
- uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
Expand Down Expand Up @@ -236,15 +236,15 @@ jobs:
java-version: [21, 25]

steps:
- uses: actions/checkout@v4
- uses: actions/checkout@v5

- name: Setup Bun
uses: oven-sh/setup-bun@v2
with:
bun-version: ${{ matrix.bun-version }}

- name: Setup Java
uses: actions/setup-java@v4
uses: actions/setup-java@v5
with:
java-version: ${{ matrix.java-version }}
distribution: "temurin"
Expand Down
2 changes: 1 addition & 1 deletion README.md
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Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@ A powerful, extensible code generation toolkit for FHIR ([Fast Healthcare Intero
| Feature | TypeScript | Python | C# | Mustache |
|-----------------------------------|------------|---------|------|----------|
| Resources & Complex Types | yes | yes | yes | template |
| Polymorphic container `Bundle<T>` | yes | no | no | no |
| Polymorphic container `Bundle<T>` | yes | yes | no | no |
| Value Set Bindings | inline | limited | enum | template |
| Primitive Extensions | yes | no | no | no |
| Profiles | yes | no | no | no |
Expand Down
8 changes: 4 additions & 4 deletions bun.lock
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4 changes: 2 additions & 2 deletions package.json
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Original file line number Diff line number Diff line change
Expand Up @@ -66,8 +66,8 @@
},
"homepage": "https://github.com/atomic-ehr/codegen#readme",
"dependencies": {
"@atomic-ehr/fhir-canonical-manager": "^0.0.21",
"@atomic-ehr/fhirschema": "0.0.10",
"@atomic-ehr/fhir-canonical-manager": "0.0.22",
"@atomic-ehr/fhirschema": "0.0.11",
"mustache": "^4.2.0",
"picocolors": "^1.1.1",
"yaml": "^2.8.3",
Expand Down
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