Fixes and updates to the YAML tutorial and YAML documentation#516
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-Update text, fix typos -Fix broken links and paths -Fix worked example table -Consistent spelling of 'initialization'
Update notebook text, fix broken links
-Added description of plots and how to "turn off" disease components in the YAML file -Formatting, spelling edits
-Add png files of databook screenshots -Update links -Formatting and spelling
Update spelling of 'optimization' for consistency
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The main changes here are:
YAML TUTORIAL
-Fixed links to other sections and pages
-Fixed formatting of the table in the worked example
-Updated directories in the code for consistency with the new document structure
-Added deaths calibration step to all worked example solution files
-Added brief descriptions of the calibrated plots in the tutorial
-Added a description of how to "turn off" the epidemiological components during the first pass of the population calibration, as an alternative to the already described whole calibration algorithm
-Wording changes and spelling corrections
YAML DOCUMENTATION
-Added the referenced databook screenshots
-Wording changes and spelling corrections