Skip to content

molstar

Bankn8II©$A edited this page Oct 25, 2025 · 1 revision

Welcome to the molstar wiki!

lokalt: L:/WEBB_OFFLINE/chem/emolviewer

L:\Clones_github\3d3emolstar\

https://aibolem.github.io/molstar/

image

https://aibolem.github.io/molstar/viewer/

image

https://aibolem.github.io/molstar/demos/lighting/

image

https://aibolem.github.io/molstar/demos/ihm-restraints/index.html

image

whole cartoon series at kinase story; just click play button & enjoy uPp to 11 frames

there are other storys too on right uPper side, in dropdown menu

https://aibolem.github.io/molstar/demos/mvs-stories/index.html?story=kinase

image

https://aibolem.github.io/molstar/demos/alpha-orbitals/index.html

image

need look uPp

https://aibolem.github.io/molstar/viewer-docs

https://molstar.org/viewer-docs/

image

molx

viewer url + ?snapshot-url=

https://aibolem.github.io/molstar/viewer/?snapshot-url=

  • url of molx file for example: zikaem.molx
https://aibolem.github.io/molstar/demos/states/

&& +

&snapshot-url-type=molx

so we get long link, there we can change file name from repositoriets file list lokated @:

https://github.com/aibolem/molstar/tree/master/demos/states

3D Controls

Rotate Drag using left mouse button or Rotate around z-axis (roll) Drag using left mouse button + control key + shift key Pan Drag using right mouse button or left mouse button + control key Focus Drag using three fingers Focus and zoom Drag using wheel/middle mouse button Zoom Scroll using wheel/middle mouse button Clip Scroll using wheel/middle mouse button + shift key Move forward Press w or gamepad up Move back Press s or gamepad down Move left Press a Move right Press d Move up Press r Move down Press f Roll left Press q Roll right Press e Pitch up Press arrow up + shift key Pitch down Press arrow down + shift key Yaw left Press arrow left + shift key Yaw right Press arrow right + shift key Boost move Press shift left Enable pointer lock Press space + control key

image

massor av installingar på vänster sidan.

that what we see in the middle of the molecule

image

motor-hook.molx

https://aibolem.github.io/molstar/viewer/?snapshot-url=https://aibolem.github.io/molstar/demos/states/motor-hook.molx&snapshot-url-type=molx

image image

Intra-chain restraints

image

An MD snapshot of cellohexaose chain with restraints inducing two kinds of intrachain HB's: O3-H· · · O5 and O2-H· · · O6. All such HB's are represented by dashed lines. The O and C atoms are in red and gray colors respectively.

https://aibolem.github.io/molstar/mol-view-spec/index.html

image image image

.mvsj


more examples @ https://github.com/aibolem/molstar/tree/master/mol-view-spec/examples

https://aibolem.github.io/molstar/viewer

?mvs-url=

then link with one of example .mvsj file name

https://aibolem.github.io/molstar/mol-view-spec/examples/basic/state.mvsj

and

&mvs-format=mvsj&hide-controls=1

so we get next long link:

image

then volume and segmentations with live examples, just click on them

https://aibolem.github.io/molstar/volumes-and-segmentations/index.html

image image

or buil link on that way with outher file url

https://aibolem.github.io/molstar/molstar-volseg/index.html?cvsx-url=https://rawcdn.githack.com/molstar/molstar-volseg/2c677ab0f1b7b7d27f292e0bd209de83e732d216/vs_toolkit/sample_cvsx/emd-1832.cvsx

image

Mesoscale exploreer

https://aibolem.github.io/molstar/me/index.html

image image image

on https://aibolem.github.io/molstar/ we have more links wit Visual Studio coder extensions like that, with long description

"dzama lee ИА iЯА" = 'Arian Jamasb (badge of "gan" modeled geschichtes by G.C.U. Geo ComPOSARC Unioჼ, sience 928 A.C. (ja, und keine sorge! astro satelites existes allways, sience first ones arrived, untill they preparate h²o or O² etc ... untill peoples or puples arrival ...

https://marketplace.visualstudio.com/items?itemName=ArianJamasb.protein-viewer

image

Clone this wiki locally