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Releases: bede/vespasian

0.5.3

14 Dec 14:22

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  • Zenodo release

0.5.2

10 Dec 13:43

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  • Fixes issue where critical value for m3Discrtk2 vs m3Discrtk3 could be nonzero
  • Generates Chi-squared critical values using SciPy (previously hardcoded)

0.5.1

20 Apr 16:24

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  • Fixes bug reporting ambiguous positively selected codons (*) (@david0rr)
  • Removes confusing positive_selection column from output
  • Dependency pinning
  • Github actions CI

v0.4.0

12 Feb 19:06

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  • LRT calculation bugfix

v0.3.0

15 Mar 15:34

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  • Tests against more edge cases
  • vespasian report now has --progress option
  • Readme improvements

v0.2.4

05 Mar 17:26

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  • Symlinked trees and alignments per family for improved performance
  • Better warnings for branch labelling errors
  • vespasian report functionality

v0.2.0

10 Apr 12:57

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Snakemake support for model execution

v0.1.0

22 Mar 15:10

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Working vespa infer-gene-trees and vespa codeml-setup

Published on PyPI:
pip install vespa-slim