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andes 0.2.0

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@github-actions github-actions released this 22 Jun 13:28
· 2 commits to main since this release
v0.2.0
ba2a6aa
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Learn about vigilant mode.

What's Changed

  • feat: PTM-refinement cascade + out-of-core mmap candidate index by @ypriverol in #1
  • andes --rescore: integrated search + Percolator (PEP/q into QPX) by @ypriverol in #2
  • QPX OpenMS-compat: protein_groups, external-decoy suffix, percolator features in psm_metavalues by @ypriverol in #4
  • MS-GF+ independence hardening: remove Java oracle, gate .param loader, scrub naming by @ypriverol in #3
  • Remove the MS-GF+ .param reader/migrator (no MS-GF+ code) by @ypriverol in #6
  • Model-independence gate: fail if any shipped model is the MS-GF+ seed (E1) by @ypriverol in #5
  • Release v0.2.0 — field-beating winning model bundle + --score auto by @ypriverol in #7

New Contributors

Full Changelog: https://github.com/bigbio/andes/commits/v0.2.0

What's Changed

  • feat: PTM-refinement cascade + out-of-core mmap candidate index by @ypriverol in #1
  • andes --rescore: integrated search + Percolator (PEP/q into QPX) by @ypriverol in #2
  • QPX OpenMS-compat: protein_groups, external-decoy suffix, percolator features in psm_metavalues by @ypriverol in #4
  • MS-GF+ independence hardening: remove Java oracle, gate .param loader, scrub naming by @ypriverol in #3
  • Remove the MS-GF+ .param reader/migrator (no MS-GF+ code) by @ypriverol in #6
  • Model-independence gate: fail if any shipped model is the MS-GF+ seed (E1) by @ypriverol in #5
  • Release v0.2.0 — field-beating winning model bundle + --score auto by @ypriverol in #7

New Contributors

Full Changelog: https://github.com/bigbio/andes/commits/v0.2.0

What's Changed

  • feat: PTM-refinement cascade + out-of-core mmap candidate index by @ypriverol in #1
  • andes --rescore: integrated search + Percolator (PEP/q into QPX) by @ypriverol in #2
  • QPX OpenMS-compat: protein_groups, external-decoy suffix, percolator features in psm_metavalues by @ypriverol in #4
  • MS-GF+ independence hardening: remove Java oracle, gate .param loader, scrub naming by @ypriverol in #3
  • Remove the MS-GF+ .param reader/migrator (no MS-GF+ code) by @ypriverol in #6
  • Model-independence gate: fail if any shipped model is the MS-GF+ seed (E1) by @ypriverol in #5
  • Release v0.2.0 — field-beating winning model bundle + --score auto by @ypriverol in #7

New Contributors

Full Changelog: https://github.com/bigbio/andes/commits/v0.2.0

Contributors

ypriverol
Assets 5
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