Skip to content

Feature/dat bypass workflow#19

Merged
ypriverol merged 6 commits intodevfrom
feature/dat-bypass-workflow
Apr 13, 2026
Merged

Feature/dat bypass workflow#19
ypriverol merged 6 commits intodevfrom
feature/dat-bypass-workflow

Conversation

@ypriverol
Copy link
Copy Markdown
Member

@ypriverol ypriverol commented Apr 13, 2026

No description provided.

ypriverol and others added 6 commits April 13, 2026 21:38
@ypriverol @claude
Fix SVG overlaps, bundle QPX test data, update test config
24757bf 
- Add minimal QPX test dataset (50 spectra, 14 KB) in test_data/TEST001/
- Update test.config with default_species/default_instrument for QPX
- Fix SVG workflow diagram: wider spacing, no overlapping labels/badges
- Update .gitignore to allow test_data/

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
@ypriverol
Enhance CI workflow with syntax and data validation
0f14f94 
Updated CI workflow to include syntax validation and test data checks.
@ypriverol
Refactor CI workflow for nf-core
ba362a8
@ypriverol
Update ci.yml
20c1737
@ypriverol
Fix ci.yml artifact upload indentation
e42bb24 
Agent-Logs-Url: https://github.com/bigbio/spectrafuse/sessions/955c5f4a-8a76-437f-b5c2-f9c5f8ba6f3d

Co-authored-by: ypriverol <52113+ypriverol@users.noreply.github.com>
@ypriverol
Merge pull request #18 from bigbio/copilot/fix-ci-yml-workflow
cccc8ac 
Fix CI workflow YAML parse error in artifact upload step
@coderabbitai
Copy link
Copy Markdown

coderabbitai bot commented Apr 13, 2026

Important

Review skipped

Auto reviews are disabled on base/target branches other than the default branch.

Please check the settings in the CodeRabbit UI or the .coderabbit.yaml file in this repository. To trigger a single review, invoke the @coderabbitai review command.

⚙️ Run configuration

Configuration used: defaults

Review profile: CHILL

Plan: Pro

Run ID: cd6b0eb3-0696-4206-b1a3-19702f7821ed

You can disable this status message by setting the reviews.review_status to false in the CodeRabbit configuration file.

Use the checkbox below for a quick retry:

  • 🔍 Trigger review
✨ Finishing Touches
🧪 Generate unit tests (beta)
  • Create PR with unit tests
  • Commit unit tests in branch feature/dat-bypass-workflow

Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out.

❤️ Share

Comment @coderabbitai help to get the list of available commands and usage tips.

@ypriverol ypriverol merged commit ce3c7dd into dev Apr 13, 2026
2 of 4 checks passed
@codacy-production
Copy link
Copy Markdown

codacy-production bot commented Apr 13, 2026

Up to standards ✅

🟢 Issues 0 issues

Results:
0 new issues

View in Codacy

TIP This summary will be updated as you push new changes. Give us feedback

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

No reviews

Assignees

No one assigned

Labels

None yet

Projects

None yet

Milestone

No milestone

Development

Successfully merging this pull request may close these issues.

2 participants

@ypriverol