Apply min/max.genes filter to pre-computed matrices#11
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Fixes #8: .convert_geneset_to_matrix now filters matrix columns by colSums instead of returning as-is, and all plaid* functions call it unconditionally for all input types. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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Fixes #8.
min.genes/max.geneswere silently ignored whenmatGwas passed as a pre-computed matrix. Now.convert_geneset_to_matrixfilters matrix columns bycolSums(non-zero entries) instead of returning as-is, and allplaid*functions call it unconditionally for all input types.(done by Claudio..)