Skip to content

Add error handling fallback in getOrthoSpecies function#412

Merged
ivokwee merged 1 commit intodevelfrom
fix-getorthospecies-fallback
Jan 12, 2026
Merged

Add error handling fallback in getOrthoSpecies function#412
ivokwee merged 1 commit intodevelfrom
fix-getorthospecies-fallback

Conversation

@ivokwee
Copy link
Member

@ivokwee ivokwee commented Jan 12, 2026

When orthogene::map_species fails or returns NULL, the function now falls back to using the table method instead of failing. This improves robustness when the gprofiler method is unavailable.

🤖 Generated with Claude Code

When orthogene::map_species fails or returns NULL, the function now
falls back to using the table method instead of failing. This improves
robustness when the gprofiler method is unavailable.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
@ivokwee ivokwee requested review from ESCRI11 and zitoa January 12, 2026 08:46
@ivokwee ivokwee merged commit a0b70d6 into devel Jan 12, 2026
2 of 5 checks passed
@ESCRI11 ESCRI11 deleted the fix-getorthospecies-fallback branch January 12, 2026 19:49
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants