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DUMMEST (DUMMER without Explicit Sequence Translation) finds similar regions between query DNA sequences containing frameshift errors/mutations and protein profile HMMs.

This is useful for annotating metagenomic, genomic, transcriptomic sequences generated by long-read sequencers, which are known to have a high rate of frameshift-inducing errors.

Go to the Pages sidebar on your right (or below) to find information on installation, usage, known issues, etc.