v0.6.0 (7-1-2026) - Fixing homopolymer issues, parameter tweaking, abPOA implementation, and slight fix for highly recombinant + high-cov genomes
- Added homopolymer compression during polishing for stretches with > 10 homopolymers. This fixes some issues during eukaryotic polishing.
- Using abPOA instead of SPOA in most cases to speed up polishing.
- Added a heuristic for filtering highly heterogeneous / recombining genomic reads
- We now output timing information for each step in myloasm
- Slightly stricter on overlapping criterion.
- Allow higher -c values by FracMinHash
Minor:
- Ran rustfmt on code.
- Changed to output * in GFA when no sequence is present. (thanks dwpeng at #24).
- Fixed log outputs when redirecting from STDERR so it doesn't show weird outputs due to colors.