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Clippy is like having a reviewer fix your dodgy code.
When one directory was a substring of another with files in the files could appear as children of the wrong directory Fix: #25
Before this fix adding a single dot to the end of a path would cause the code to crash.
Fixes: #22 Allows code to run on the root directory
clean up: 80338f4 Fixes -d flag to work again. Add test to stop regression
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