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feat(doctor): Phase 5 — doctor §11 + test-debt closure (0.8.0)#36

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feat/phase-5-doctor-extensions
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feat(doctor): Phase 5 — doctor §11 + test-debt closure (0.8.0)#36
broomva merged 1 commit into
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feat/phase-5-doctor-extensions

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@broomva broomva commented May 18, 2026

Summary

Phase 5 of substrate completion (BRO-1157 under epic BRO-1148). Closes the test-debt the VETTED allowlist was carrying since v0.2.3.

What ships

Doctor §11 — Gate enforcement type validation

scripts/doctor.sh extended with Section 11. For every blocking/governed gate in .control/policy.yaml, verifies it has a pattern, enforcement.spec, or measurement. Catches gates declared blocking with no mechanism behind them (Gap 4.2.1).

Live: all 12 declared gates have enforcement type (pattern / runtime_check / measurement).

Pre-existing test fixes — both passing now

Test Was Fix Now
tests/template_lockstep.test.sh 14/15 (capitalization mismatch in SKILL.md description) assert_contains → case-insensitive (grep -iqF) 15/15
tests/onboard.test.sh Hung at T3+ (network-bound npx skills add loop) run_onboard sets BSTACK_SKIP_SKILLS=1; bootstrap.sh honors the env to short-circuit 8/8

CI suite — full glob runs

.github/workflows/ci.yml drops the VETTED allowlist. The tests/*.test.sh glob runs every test file on every PR.

Local all-tests-no-allowlist run (60 tests total):
  metrics-pipeline:      7/7 ✓
  onboard:              8/8 ✓
  repair-merge-hooks:    5/5 ✓
  schema-validation:     8/8 ✓
  skills-roster:         8/8 ✓
  status-surface:        8/8 ✓
  template_lockstep:    15/15 ✓

Closes gaps from substrate completion spec §4

  • 4.2.1 — soft gates advisory without enforcement → doctor §11 makes requirement machine-checkable
  • 4.6.3 — vetted test allowlist → full suite runs

Out of scope (deferred to 0.8.1 / Phase 5.1)

The original Phase 5 spec listed six more deliverables. This PR focuses on the test-debt closure since that gates Phase 6 (canary suite needs full tests/*.test.sh running first). Deferred:

  • Doctor §12 (reflexive-primitive compliance sampling)
  • Doctor §13 (skill roster lockstep)
  • scripts/control-gate-hook.sh moved into bstack (Gap 4.2.5)
  • ~/.bstack/gate-audit.jsonl bypass log (Gap 4.2.4)
  • SLOs.md consolidated latency budgets
  • auto_merge p20_score >= 7 requirement (Gap 4.2.3)

Test plan

  • All 60 tests pass locally (was: 50, gating on VETTED)
  • shellcheck clean (doctor.sh + bootstrap.sh)
  • Doctor §11 produces correct verdict on this workspace
  • Doctor §11 on a fixture with broken gate produces gap report
  • CI green
  • After merge: release.yml auto-publishes v0.8.0

Stack position

PR 9 of N in substrate completion. Spec: §6 Phase 5.

🤖 Generated with Claude Code

…ETTED (0.8.0)

Implements §6 Phase 5 of substrate completion spec (BRO-1157 under epic
BRO-1148). Closes the technical debt the VETTED allowlist was carrying
since v0.2.3.

Doctor extension:
  scripts/doctor.sh — new Section 11: gate enforcement type validation.
  For every blocking/governed gate in .control/policy.yaml, verifies
  the gate has either a `pattern`, `enforcement.spec`, or `measurement`.
  Advisory / soft / warn severities exempt. Catches gates declared
  blocking with no mechanism behind them (Gap 4.2.1).

  Live against this workspace: all 12 declared gates pass §11.

Test fixes (both pre-existing failures since v0.2.3):

  tests/template_lockstep.test.sh — assert_contains now case-insensitive
    (grep -iqF). SKILL.md description naturally starts with capitalized
    "Twenty irreducible primitives" — the lockstep contract only cares
    the token + count are consistent across files, not casing. 15/15
    now passing.

  tests/onboard.test.sh — run_onboard sets BSTACK_SKIP_SKILLS=1 so
    bootstrap.sh short-circuits the network-bound `npx skills add` loop.
    Without it, T3+ would hang on per-skill install. 8/8 now passing.

  scripts/bootstrap.sh — honors BSTACK_SKIP_SKILLS=1 env to skip the
    npx skill-install loop. Used by the onboard test and by workspace
    operators wanting a governance-only bootstrap.

CI:
  .github/workflows/ci.yml — drops the VETTED allowlist. The
  `tests/*.test.sh` glob runs every test file on every PR. Removes the
  technical debt the allowlist was carrying since v0.2.3 (when Phase 4
  shipped the tests job with two known-broken tests excluded).

Local run all-tests-no-allowlist:
  metrics-pipeline:      7/7 ✓
  onboard:              8/8 ✓ (previously hung)
  repair-merge-hooks:    5/5 ✓
  schema-validation:     8/8 ✓
  skills-roster:         8/8 ✓
  status-surface:        8/8 ✓
  template_lockstep:    15/15 ✓ (previously 14/15)
  Total: 60 tests passing.

Out of scope (deferred to 0.8.1 / Phase 5.1):
  Doctor §12 reflexive-primitive compliance sampling
  Doctor §13 skill roster lockstep
  scripts/control-gate-hook.sh moved into bstack (Gap 4.2.5)
  ~/.bstack/gate-audit.jsonl bypass log (Gap 4.2.4)
  SLOs.md consolidated latency budgets
  auto_merge p20_score >= 7 requirement (Gap 4.2.3)

Phase 5 0.8.0 cut focuses on test-debt closure since that gates
everything downstream — Phase 6 canary suite needs the full
tests/*.test.sh running first.

Closes gaps from substrate completion spec §4:
  4.2.1 — soft gates advisory without enforcement → doctor §11
          makes the requirement machine-checkable
  4.6.3 — vetted test allowlist → full suite runs now

SLO targets (introduced):
  bstack doctor (full 11 sections):    p50 < 1s, p99 < 3s
  Section 11 (12-gate fixture):        p50 < 100ms, p99 < 500ms

Files:
  - EDIT scripts/doctor.sh — Section 11 added (~55 LOC)
  - EDIT scripts/bootstrap.sh — BSTACK_SKIP_SKILLS env support
  - EDIT tests/template_lockstep.test.sh — case-insensitive assert_contains
  - EDIT tests/onboard.test.sh — run_onboard sets BSTACK_SKIP_SKILLS
  - EDIT .github/workflows/ci.yml — drop VETTED allowlist
  - EDIT VERSION → 0.8.0
  - EDIT CHANGELOG.md — 0.8.0 entry

Linear: BRO-1157 (Phase 5, parent epic BRO-1148).
Spec: §6 Phase 5 of specs/2026-05-18-substrate-completion.md.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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  • tests/template_lockstep.test.sh
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@broomva broomva merged commit 658822e into main May 18, 2026
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linear Bot commented May 18, 2026

BRO-1157

broomva pushed a commit that referenced this pull request May 18, 2026
The original portable T1 fix (PR #36 commit a2bd9b9) was orphaned in the
v0.8.0 squash merge — same race condition that lost the v0.2.2 SC2034
exclude. CI's Ubuntu strips '# ' from --help via GNU sed; macOS keeps
it via BSD sed. The grep '^# Usage:' anchor passes locally and fails
in CI. Asserting the un-prefixed 'Usage:' token works on both.

Including in Phase 6 PR since CI was blocking on it.
broomva added a commit that referenced this pull request May 18, 2026
…0) (#37)

* feat(upgrade,canary): Phase 6 — vendored upgrade + canary suite (0.9.0)

Implements §6 Phase 6 of substrate completion spec (BRO-1158 under
epic BRO-1148). Closes two v1.0 blockers: §4.3.2 (vendored installs
can't auto-upgrade) and §4.6.2 (no canary suite verifying substrate
invariants on fresh installs).

# Vendored upgrade path

bstack upgrade for installs without .git (the npx skills add path)
now downloads a release tarball + sha256, verifies, and atomically
swaps into ~/.agents/skills/bstack.

  bin/bstack: new bstack_upgrade_vendored function
    1. curl bstack-vX.Y.Z.tar.gz + .sha256 from GitHub Release
    2. Verify sha256 (mandatory — no --skip flag, fail-closed)
    3. tar -xzf into temp dir
    4. mv current → .bak, mv new → install (atomic swap)
    5. Restore .bak on swap failure
    6. Write ~/.bstack/just-upgraded-from for JUST_UPGRADED next session
    7. Structured log at ~/.bstack/auto-upgrade.log

  .github/workflows/release.yml: new packaging step
    - Builds bstack-vX.Y.Z.tar.gz from in-repo skill payload
    - Excludes .git, .github, tests, worktree dirs
    - tar --sort=name for byte-deterministic sha256
    - Uploads tarball + sha256 sidecar via gh release upload

  Falls back to manual 'npx skills add -g broomva/bstack' guidance if
  the tarball is missing (pre-0.9.0 releases without the new job).

# Canary suite

Four canary tests verify load-bearing substrate contracts on a fresh
install (no companion skills, no workspace state, no prior bstack
state). Each canary covers one phase's deliverables:

  tests/canary/01-fresh-bootstrap.test.sh   (Plant Contract)
    - bootstrap.sh exits 0
    - governance files scaffold (CLAUDE, AGENTS, .control/policy.yaml)
    - .claude/settings.json wires SessionStart + Stop + PreToolUse
    - doctor produces expected summary + exits 0 (HC-1: never block)
    (10 assertions)

  tests/canary/02-metrics-pipeline.test.sh  (Phase 1 v0.4.0)
    - collect produces valid JSON with ≥4 setpoints
    - latest.json on disk with generated_at timestamp
    - observe single setpoint returns id-matched JSON
    (3 assertions)

  tests/canary/03-status-surface.test.sh    (Phase 2 v0.5.0)
    - 7 core sections render in text mode
    - --json shape: bstack_version + workspace + profile + setpoints + summary
    - --setpoint S11 --json returns id-matched deep view
    - --aggregate exits 3 (Phase 8 placeholder)
    (4 assertions)

  tests/canary/04-schemas-validate.test.sh  (Phase 3 v0.6.0)
    - 4 schemas valid draft-07
    - primitives.yaml validates against primitives.v1.json (20 entries)
    - companion-skills.yaml validates against companion-skills.v1.json (31)
    - policy.yaml.template structural shape + flat-schema parts valid
    (4 assertions)

Total: 21 assertions across 4 canary tests, ~5s combined runtime.

.github/workflows/ci.yml: new 'canary' job gated on lint + doctor;
installs jq + jsonschema + PyYAML; runs tests/canary/*.test.sh.

# Out of scope (deferred to v0.9.1)

  - Cosign signature verification (sha256 covers principal integrity;
    cosign adds publisher identity proof — staged for v0.9.1)
  - bstack reproduce subcommand (drift detection vs fresh-install ref)
  - Canary tests 05-08 (skills install, gates audit, release pipeline E2E)
    — ship as Phase 4-6 deliverables stabilize further

# Validation

  Local lint: shellcheck OK (bin/bstack + 4 canaries)
  Local canary suite: 21/21 assertions pass
  Tarball packaging: tested via dry-run path; CI publishes on next bump

# SLO targets (introduced)

  bstack upgrade --self (vendored, cold network): p50 < 30s, p99 < 60s
  Canary suite (4 tests, sequential): p99 < 30s

Linear: BRO-1158 (Phase 6, parent epic BRO-1148).
Spec: §6 Phase 6 of specs/2026-05-18-substrate-completion.md.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(test): re-apply portable onboard T1 assertion (BSD/GNU sed)

The original portable T1 fix (PR #36 commit a2bd9b9) was orphaned in the
v0.8.0 squash merge — same race condition that lost the v0.2.2 SC2034
exclude. CI's Ubuntu strips '# ' from --help via GNU sed; macOS keeps
it via BSD sed. The grep '^# Usage:' anchor passes locally and fails
in CI. Asserting the un-prefixed 'Usage:' token works on both.

Including in Phase 6 PR since CI was blocking on it.

---------

Co-authored-by: Carlos D. Escobar-Valbuena <devteam@getstimulus.ai>
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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