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  1. contamination-qc-pipeline contamination-qc-pipeline Public

    NGS contamination QC pipeline integrating VerifyBamID2 and NGSTroubleFinder for BAM-level sequencing quality control

    Shell 2

  2. Giardia-duodenalis-Genome-Assembly Giardia-duodenalis-Genome-Assembly Public

    Genome assembly and evaluation of Giardia duodenalis using Oxford Nanopore long-read data (Snakemake pipeline with debugging and optimization)

    Python

  3. Diabetes Diabetes Public

    Jupyter Notebook