Skip to content

candycode/chemreader

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

16 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

ChemReader

Library for importing chemical data; focus is on electronic structure and the following file formats:

  • Molden
  • Gaussian logs and cube
  • GAMESS
  • ADF t41

Support for the following data formats will be available as well:

  • PDB
  • ShellX

The project is dependent on Parsley a C++ parsing framework supporting context-sensitive processing.

Parsed data include:

  • unit cell
  • affine transform
  • atom name, element type and coordinates
  • atomic orbitals as GTO or STO basis sets
  • molecular obitals as LCAO
  • density and spin matrix
  • electrostatic potential
  • vibrational modes
  • scalar fields

Note that no computation is going to be performed by the library: bonds, density matrix and scalar fields are read from file if available.

Minimal support for biochemical data will be available as well:

  • backbone extraction
  • residues
  • secondary and tertiary structures

About

No description, website, or topics provided.

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

 
 
 

Contributors