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Adds a pixi.toml to seperate exclusive pixi commands from pyproject.toml #77

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Merged
norlandrhagen merged 1 commit into from
Jul 1, 2025
Merged

Adds a pixi.toml to seperate exclusive pixi commands from pyproject.toml #77

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54 changes: 54 additions & 0 deletions pixi.toml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,54 @@
[project]
channels = ["conda-forge"]
name = "ocr"
platforms = ["linux-64", "osx-arm64", "osx-64"]

[pypi-dependencies]
ocr = { path = ".", editable = true }

# conda specific deps
[dependencies]
python = ">=3.12"

[environments]
default = { solve-group = "default" }
data-mgmt = { features = ["data-mgmt"], solve-group = "default" }
lint = { features = ["lint"], solve-group = "default" }
test = { features = ["test"], solve-group = "default" }
docs = { features = ["docs"], solve-group = "default" }
dev = { features = ["dev"], solve-group = "default" }

[feature.data-mgmt.pypi-dependencies]
ocr = { path = ".", editable = true, extras = ["data-mgmt"] }

[feature.lint.pypi-dependencies]
ocr = { path = ".", editable = true, extras = ["lint"] }

[feature.test.pypi-dependencies]
ocr = { path = ".", editable = true, extras = ["test"] }

[feature.docs.pypi-dependencies]
ocr = { path = ".", editable = true, extras = ["docs"] }

[feature.dev.pypi-dependencies]
ocr = { path = ".", editable = true, extras = ["dev"] }

[feature.test.tasks]
tests = { cmd = "pytest" }

[feature.lint.tasks]
format = { cmd = "ruff format" }
lint = { cmd = "ruff check" }
precommit = { cmd = "pre-commit run --all-files" }

[feature.docs.tasks]
docs-serve = { cmd = "mkdocs serve" }
docs-build = { cmd = "mkdocs build" }

[feature.data-mgmt.tasks]
jupyter = { cmd = "jupyter lab" }

[tasks]
export-conda-file = { cmd = "pixi project export conda-environment > environment.yml" }
start-coiled-notebook = { cmd = "coiled notebook start --sync --vm-type m5.xlarge --sync-ignore .pixi" }
start-coiled-notebook-bigger = { cmd = "coiled notebook start --sync --vm-type m5.2xlarge --sync-ignore .pixi" }
144 changes: 50 additions & 94 deletions pyproject.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -3,8 +3,7 @@
requires = ["setuptools-scm[toml]>=6.2", "setuptools>=64", "wheel"]

[project]

dependencies = [
dependencies = [
"bokeh>=3.7.3",
"bottleneck>=1.5.0",
"cartopy>=0.24.1",
Expand All @@ -14,34 +13,71 @@
"duckdb>=1.3.0",
"flox>=0.10.4",
"fsspec>=2025.5.1",
"gcsfs>=2025.5.1",
"geopandas>=1.0.1",
"icechunk",
"ipdb>=0.13.13",
"jupyter>=1.1.1",
"jupyter-server-proxy>=4.4.0",
"mapclassify>=2.9.0",
"matplotlib>=3.10.3",
"jupyter>=1.1.1",
"jupyterlab>=4.4.0",
"numba>=0.61.2",
"numbagg>=0.9.0",
"obstore>=0.6.0",
"odc-geo>=0.4.10",
"opencv-python>=4.11.0.86",
"opt-einsum>=3.4.0",
"pre-commit>=4.2.0",
"pyarrow>=20.0.0",
"pydantic>=2.11.5",
"rasterio>=1.4.3",
"regionmask>=0.13.0",
"rioxarray>=0.19.0",
"s3fs>=2025.5.1",
"ty>=0.0.1a7",
"xarray>=2025.4.0",
"zarr>=3.0.8",
"pre-commit>=4.2.0",
]


dynamic = ["version"]
name = "ocr"
requires-python = ">= 3.12"


[project.optional-dependencies]
lint = [
"pre-commit>=4.2.0",
"ruff>=0.11.0",
"ty>=0.0.1a7",
"pre-commit>=4.2.0"
]
test = [
"pytest>=8.3.5",
"pytest-cov>=6.0.0",
"ipdb>=0.13.13"
]
data-mgmt = [
"boto3>=1.37.1",
"jupyterlab>=4.3.6",
"planetary-computer>=1.0.0",
"geemap>=0.35.3",
"earthengine-api>=1.5.11",
"adlfs>=2024.12.0",
"gcsfs>=2025.5.1",
"patool>=4.0.0",
"awscli>=1.40.26",
]

# Docs includes lint tools for code formatting in docs
docs = [
"ocr[lint]",
"markdown-exec>=1.10.3",
"mkdocs>=1.6.1",
"mkdocs-click>=0.9.0",
"mkdocs-material>=9.6.14",
"mkdocstrings>=0.29.1",
"mkdocstrings-python>=1.16.12",
]
dynamic = ["version"]
name = "ocr"
requires-python = ">= 3.12"


dev = ["ocr[test,lint,docs]"]


[tool.setuptools.packages.find]
include = ["ocr*"]
Expand Down Expand Up @@ -90,6 +126,7 @@
"site-packages",
"venv",
]

[tool.ruff.lint]
ignore = [
"E501", # Conflicts with ruff format
Expand Down Expand Up @@ -136,86 +173,5 @@
]
console_output_style = "count"

[tool.pixi.project]
channels = ["conda-forge"]
name = "ocr"
platforms = ["linux-64", "osx-arm64", "osx-64"]

[tool.pixi.pypi-dependencies]
ocr = { path = ".", editable = true }

[tool.pixi.dependencies]
bottleneck = ">=1.4.2,<2"
distributed = ">=2025.2.0,<2026"
flox = ">=0.10.1,<0.11"
fsspec = ">=2025.3.0,<2026"
geodatasets = ">=2024.8.0,<2025"
geopandas = ">=1.0.1,<2"
netcdf4 = ">=1.7.2,<2"
numba = ">=0.54"
numbagg = ">=0.9.0,<0.10"
opt-einsum = ">=3.4.0,<4"
pooch = ">=1.8.2,<2"
pydantic = ">=2.10.6,<3"
python-duckdb = ">=1.2.1,<2"
s3fs = ">=2025.3.0,<2026"
windrose = ">=1.9.2 ,<2"
xarray = ">=2025.3.0,<2026"
zarr = ">=3.0.8,<4"
jupyterlab = ">=4.4.0,<5"
geemap = ">=0.35.3,<0.36"
earthengine-api = ">=1.5.11,<2"
planetary-computer = ">=1.0.0,<2"
adlfs = ">=2024.12.0,<2025"
coiled = "==1.101.1"

[tool.pixi.environments]
data-mgmt = ["data-mgmt"]
lint = ["lint"]
test = ["test"]

[tool.pixi.feature.test.dependencies]
pytest = ">=8.3.5,<9"
pytest-cov = ">=6.0.0,<7"

[tool.pixi.feature.lint.dependencies]
pre-commit = ">=4.2.0,<5"
ruff = ">=0.11.0,<0.12"

[tool.pixi.feature.data-mgmt.dependencies]
awscli = ">=2.25.1,<3"
boto3 = ">=1.37.1,<2"
jupyterlab = ">=4.3.6,<5"
patool = ">=4.0.0,<5"


[tool.pixi.feature.test.tasks]
tests = { cmd = "pytest" }

[tool.pixi.feature.lint.tasks]
format = { cmd = "ruff format" }
lint = { cmd = "ruff" }
precommit = { cmd = "pre-commit run" }

[tool.pixi.feature.data-mgmt.tasks]
jupyter = { cmd = "jupyter lab" }

[tool.pixi.tasks]
export-conda-file = { cmd = "pixi project export conda-environment > environment.yml" }
start-coiled-notebook = { cmd = "coiled notebook start --sync --vm-type m5.xlarge --sync-ignore .pixi" }
start-coiled-notebook-bigger = { cmd = "coiled notebook start --sync --vm-type m5.2xlarge --sync-ignore .pixi" }

[tool.uv.sources]
ocr = { workspace = true }

[dependency-groups]
docs = [
"markdown-exec>=1.10.3",
"mkdocs>=1.6.1",
"mkdocs-click>=0.9.0",
"mkdocs-material>=9.6.14",
"mkdocstrings>=0.29.1",
"mkdocstrings-python>=1.16.12",
"ocr",
"ruff>=0.12.0",
]
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