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Local MMseqs2 MSA search, ColabFold DB download via ct tool pull .github/workflows/ci.yml #110: Commit 440d9aa pushed by ivanvrkic
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Add 11 new research tools across genomics, galaxy, biobank, and metag… .github/workflows/ci.yml #109: Commit 65d7c00 pushed by dvdijk
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Remove dead manifest system, enhance ct tool list/pull, align tool sc… .github/workflows/ci.yml #108: Commit d8f3b11 pushed by ivanvrkic
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Add NIM-style structure tool contracts and cloud compatibility fixes. .github/workflows/ci.yml #107: Commit b3c0034 pushed by ivanvrkic
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Remove structure parity tests from the CLI repo. .github/workflows/ci.yml #106: Commit 370287f pushed by ivanvrkic
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Add NIM-style structure tool contracts and cloud parity fixes. .github/workflows/ci.yml #105: Commit 18f8187 pushed by ivanvrkic
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Add ct.agent.quality module for synthesis evaluation .github/workflows/ci.yml #104: Pull request #7 by shouryasrivastava
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Show masked feedback while entering API keys .github/workflows/ci.yml #103: Commit c97efcc pushed by ivanvrkic
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Fix installer setup when run via curl pipe .github/workflows/ci.yml #102: Commit a340be3 pushed by ivanvrkic
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Update README install command to use bash script. .github/workflows/ci.yml #101: Commit 16d3b2a pushed by ivanvrkic
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Set Opus 4.6 as the default Claude model .github/workflows/ci.yml #100: Commit d96a1c3 pushed by ivanvrkic
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Install CLI from latest PyPI release. .github/workflows/ci.yml #99: Commit 5f66e88 pushed by ivanvrkic
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Revert "Rename package from celltype-cli to celltype-agent" .github/workflows/ci.yml #98: Commit 2d74b73 pushed by ivanvrkic
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Allow local PDB file paths for structure jobs. .github/workflows/ci.yml #97: Commit 63f2b80 pushed by ivanvrkic
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Allow local PDB file paths for structure jobs. .github/workflows/ci.yml #96: Commit 63f2b80 pushed by ivanvrkic
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Rename package from celltype-cli to celltype-agent .github/workflows/ci.yml #95: Commit 63fec97 pushed by ivanvrkic
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Inline local structure files for cloud GPU jobs. .github/workflows/ci.yml #94: Commit 660c442 pushed by ivanvrkic
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Add 31 new research tools across genomics, safety, structure, and design .github/workflows/ci.yml #93: Commit 9f5693e pushed by dvdijk
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Add startup update checker with 24h caching .github/workflows/ci.yml #92: Commit 4f91bdf pushed by ivanvrkic
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Rename to celltype-agent in README title and URLs .github/workflows/ci.yml #91: Commit 885f5e3 pushed by dvdijk
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Bump to v0.2.0 and add upgrade banner to README .github/workflows/ci.yml #90: Commit 2d2de6c pushed by dvdijk
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Show confirmation code in terminal for device auth verification .github/workflows/ci.yml #89: Commit c84d149 pushed by dvdijk
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Improve ct setup UX: cleaner flow, better readability .github/workflows/ci.yml #88: Commit f7ddbc2 pushed by dvdijk
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Simplify setup: cloud-first with mandatory login .github/workflows/ci.yml #87: Commit 7305378 pushed by ivanvrkic
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Add CellType Cloud client, GPU tool infrastructure, and 15 bio-ML tools .github/workflows/ci.yml #86: Commit 7d99d8e pushed by ivanvrkic
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