cs551

Repository for CS551 Final Project:

Jay Golden, Chris Sun, Alvin Zhang

Large data files (*gz) ommited from backup.

Name		Name	Last commit message	Last commit date
Latest commit History 19 Commits
GWAS_data		GWAS_data
eQTL_data		eQTL_data
figures		figures
ld_data		ld_data
merged_data		merged_data
output_data		output_data
simulation_output		simulation_output
.gitignore		.gitignore
README.md		README.md
golden_calcSNPimpact.py		golden_calcSNPimpact.py
golden_relax_struct.xml		golden_relax_struct.xml
golden_run.sh		golden_run.sh
golden_snp_reference.rmd		golden_snp_reference.rmd
sun_eQTL_process.ipynb		sun_eQTL_process.ipynb
sun_ld.ipynb		sun_ld.ipynb
sun_main_job.sh		sun_main_job.sh
sun_merge.ipynb		sun_merge.ipynb
sun_prelim_cleaning.ipynb		sun_prelim_cleaning.ipynb
sun_run_robin.ipynb		sun_run_robin.ipynb
sun_run_robin.rmd		sun_run_robin.rmd
sun_slurm_eQTL_join.R		sun_slurm_eQTL_join.R
sun_temp_processing_workbook.rmd		sun_temp_processing_workbook.rmd
zhang_robin_sim_plots.Rmd		zhang_robin_sim_plots.Rmd
zhang_sim_adroit_script.R		zhang_sim_adroit_script.R
zhang_walmart_robin.R		zhang_walmart_robin.R

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